Rhodopseudomonas boonkerdii: E0H22_12935
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Entry
E0H22_12935 CDS
T07799
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk00330
Arginine and proline metabolism
rbk00480
Glutathione metabolism
rbk01100
Metabolic pathways
rbk01110
Biosynthesis of secondary metabolites
rbk04148
Efferocytosis
Module
rbk_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
E0H22_12935
09106 Metabolism of other amino acids
00480 Glutathione metabolism
E0H22_12935
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
E0H22_12935
Enzymes [BR:
rbk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
E0H22_12935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
NUP50
Motif
Other DBs
NCBI-ProteinID:
UGV26515
LinkDB
All DBs
Position
complement(2818113..2820488)
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AA seq
791 aa
AA seq
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MDYFKRFNFLFAMPTFDADDLEGVRLNQIVEEIEKSGFEVVKARKLEDAAIAVQTDAAIG
CMVVDWGKKGLEGKTAALINLMRRRGLDFPIMLLIRRQRFEDIPVEVLDFIDGYIFLSEE
TPPFIAKNLISRLKQYAETLKTPFFGALVDYAEEGNQLWTCPGHNGGVFYSRSPIGRVFM
EHLGEAVFRDDLDNSVLDLGDLLTHEGPALQAQKEAAQIFGAEKTYFVLNGTSTSNKVAL
SALVTDGDLVLFDRNNHKAALHGALMISGGTPIYVPTVRNPWGLIGPMDWNAFSEESLRE
RIRTNPLVTDKDAWKRERPFRVAVIEQCTYDGTIYSAEMIIKRIGHLCDYILFDEAWAGF
MKFHPLYAGRFAMGLKELGPDSPGIIATQSTHKQLASFSQASQIHMKDRHIRGQKRRVEH
RRFNESFMQHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKMRAVRREF
EEKETRPERRWFFEPFVPQRVDIPDVAQPGATHSVPWESISTDQLATNPAFWQLSPDAKW
HGFPDMEAGFTMTDPNKLTVLTPGFDRATGGYAEHGIPAPVVAQYLRENQIVPEKNDLNS
LLFLLTPGVEASKAGTLVSGLVAFKKFHDDNALLEDVIPEFARRRPARYAGVRLRDLCAD
MHKFYRAADVSGLQAKQFMDQHMPEIAMSPHDAARLLVRNDVDYLPIDEITGRIATTPFV
VYPPGIATIVPGERLTERAQPMIDYLKMFETCFNTFPGFDVEIQGVYRKVDASGRIRLHT
YVVSQERDPRK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggattacttcaagcgcttcaacttcctcttcgccatgccgacgtttgacgccgacgat
ctcgagggcgttcgcctcaatcagattgttgaggaaatcgagaaatcgggcttcgaggtg
gtgaaagcgcgcaagctggaagacgccgccatcgcggtgcagactgacgccgccatcggc
tgcatggtcgtcgactggggcaagaagggcctcgagggcaagaccgccgcgctgatcaac
ctcatgcgccgtcgcggcctcgatttcccgatcatgctcctgatccgccgccagcgcttc
gaggatatcccggtcgaggtgctcgacttcatcgacggctatatcttcctgtcggaggaa
accccgcccttcatcgccaagaacctgatcagccgcctcaagcaatatgcggagacgctg
aagacgccgttcttcggcgctctcgtcgattatgccgaggaaggcaaccagctctggacc
tgcccggggcacaatggcggcgtattctacagccgcagcccgatcggccgtgtcttcatg
gagcatctcggcgaagccgtgttccgcgacgacctcgacaattccgtactcgacctcggc
gacctccttacccacgaaggtcccgcccttcaggcccagaaagaagccgcgcagattttc
ggcgcggagaagacctacttcgtcctcaacggcacttcgacctccaacaaggtcgcgctc
tctgcgctggtgaccgatggcgatctcgtgctgttcgaccgcaataatcacaaagccgca
ctgcatggcgcgctgatgatctccggtggcacgccgatctatgtgccgaccgtgcgcaat
ccctggggcctgatcggcccgatggactggaatgccttcagcgaagaatccctgcgcgag
cgtatccgtaccaatccgctggtcaccgacaaagatgcctggaagcgcgagcgtccgttc
cgcgtcgccgtcatcgagcagtgcacctatgacggcaccatctacagcgccgagatgatc
atcaagcgcatcggccatctctgcgattacatcctgttcgacgaagcctgggcgggcttc
atgaaattccacccgctctatgccggccgtttcgccatgggcctgaaggagttgggtccg
gactcgccgggcatcatcgcgacccagtcgacgcacaagcagctcgccagcttttcgcag
gcctcgcagattcacatgaaggatcgccacatccgcggtcagaagcgccgcgtcgagcat
cgccgcttcaacgagagcttcatgcagcacgcatcgacgtctccattctatccgctgttc
gcctcgctcgacgtaggtgcgcagatgatgaagggccgctcgggcgaagtgctgtgggac
gatacgatccgtctcggcatcgagctgcgcaagaagatgcgcgcggtacgccgcgaattc
gaggaaaaggagacgcgacccgagcggcgctggttcttcgagccattcgtgccgcagcgc
gtggacattcccgacgtcgcgcagcccggcgctacccacagcgtaccatgggaaagcatc
agcaccgaccagctcgccaccaatcccgctttctggcagctgtcgccggatgcgaaatgg
cacggtttcccggatatggaagccggcttcaccatgaccgatccgaacaagctgacggtg
ctgacgccgggcttcgatcgtgccaccggcggctatgccgaacacggcattccggcaccg
gtcgtcgcgcaatatttgcgcgaaaaccagatcgtaccggaaaagaacgatctcaactcg
ctccttttcctgctcacgcccggcgtcgaggccagcaaggccggcacgctggtgtcgggc
ctcgtggccttcaagaaattccatgacgacaatgctctgctcgaagacgtaattccggaa
ttcgcgcgccgccgtccggcccgctatgccggcgtacgcctgcgcgacctttgcgccgac
atgcacaagttttatcgcgcggccgacgtgagcggcctgcaggcgaagcagttcatggat
cagcacatgccggagatcgcgatgtcaccgcacgatgccgcgcgtctcctggtgcgtaac
gacgtcgactatctgcctatcgacgagattaccggccgcatcgccaccacgcccttcgtg
gtctatccgcccggcatcgccaccatcgtgccgggcgagcgcctcaccgagcgcgcgcag
ccgatgattgattatctcaagatgttcgagacctgtttcaacaccttcccgggcttcgac
gtcgaaatccagggcgtctatcgaaaggtggatgccagcggacgcatccggctccatact
tacgtggtttcccaagagcgggatccacggaagtga
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