Rhodopseudomonas boonkerdii: E0H22_13040
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Entry
E0H22_13040 CDS
T07799
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk00541
Biosynthesis of various nucleotide sugars
rbk01100
Metabolic pathways
rbk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E0H22_13040
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rbk01005
]
E0H22_13040
Enzymes [BR:
rbk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
E0H22_13040
Lipopolysaccharide biosynthesis proteins [BR:
rbk01005
]
Lipid A
E0H22_13040
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
UGV26536
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Position
2839634..2840488
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AA seq
284 aa
AA seq
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MTAPAAAAPVVELGSVRFGNDLPISVIAGPCQLESRQHALETAQALKEIAARLKIGLVYK
TSFDKANRTSASAARGIGLDDALPIFAEIRETFGLPVLTDVHENDQCARAAEVVDVLQIP
AFLCRQTDLLLAAAATGKAVNVKKGQFLAPWDMANVVKKLVGGGNDKVLVTERGASFGYN
TLVSDMRALPILARTTKAPVIFDATHSVQQPGGKGESSGGEREFVPVLARAAVAVGVAGI
FIETHPDPDNAPSDGPNMVPLCEFEALVKNLMAFDALAKQTART
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgcaccagctgccgccgcgcccgtcgttgaacttggctccgtccgtttcggcaac
gacctgccgatttcggtgattgcgggaccatgccagctggagagccggcagcacgcgctg
gaaaccgcgcaggcactgaaggaaatcgctgcgcggctgaagatcgggctcgtctacaag
acctccttcgacaaggccaaccgcaccagcgcgtctgccgcccgtggcatcggccttgat
gatgcgctgcctattttcgcggaaatccgtgagacgttcggtctccctgttctgaccgac
gttcacgagaacgaccaatgtgcgcgggctgcggaagtcgtcgacgtgctgcaaattccg
gccttcctgtgccggcagaccgacttgctgctggcagccgctgccactggcaaggcggtc
aatgtgaagaagggccagttccttgccccgtgggacatggccaatgtcgtcaagaagctg
gtcggcggcggcaacgacaaggtgctggtcaccgagcgtggcgcatccttcggctacaac
acgctggtctccgacatgcgcgcgctgccgatcctggcgcgcactaccaaggcgccggtg
atcttcgacgccacgcattcggtgcagcagccaggcggcaagggcgagtcctcgggcggc
gagcgtgaattcgtgccggtgctggcgcgggctgcggtggcggtcggtgtcgccggcatt
ttcatcgagacacatcccgatcccgacaatgcgccgtcggatgggccgaatatggtaccg
ctgtgcgagttcgaagcgctggtgaagaacctgatggcattcgacgctcttgccaagcag
acggccaggacctga
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