Rhodopseudomonas boonkerdii: E0H22_14220
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Entry
E0H22_14220 CDS
T07799
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rbk
Rhodopseudomonas boonkerdii
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rbk03009
]
E0H22_14220 (rimO)
Enzymes [BR:
rbk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E0H22_14220 (rimO)
Ribosome biogenesis [BR:
rbk03009
]
Prokaryotic type
ribosomal protein modification factors
E0H22_14220 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
CLP1_P
Baculo_E56
Motif
Other DBs
NCBI-ProteinID:
UGV26734
LinkDB
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Position
3127115..3128443
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AA seq
442 aa
AA seq
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MQQAAAPKISFVSLGCPKALVDSERIITRLRAEGYELARKHDGADVVIVNTCGFLDSAKQ
ESLGAIGEAMAVNGKVIVTGCMGAEPEQIEAAYPNVLSITGPQQYESVLEAVHRALPPVH
NPHIDLVPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRSAKDVLLEAEKLV
KAGVKELLVVSQDTSAYGVDIKYAESPWKDRSVRAKFYDLAKELGELGAWVRLQYVYPYP
HVDEVIGLMTPTSNILPYLDIPFQHAAPNVLKAMKRPASQDKTLGRIKAWREQCPDLVLR
STFIVGFPGETEDDFQYLLDWLDEAQIDRVGAFKYEPVAGAASNSIGLDVPDELKQQRWN
ALMERQQKISARRLKRKVGTRQQVIIDEVGPTVSKGRSKADAPDIDGAVYVTARRPLKVG
EIVTAKIERADNYDLHGSVAGF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggccgccgcgcccaaaatctcgtttgtgtccttaggatgccccaaagccttg
gtcgattccgagcgcatcatcacgcgcctgcgcgccgagggctatgagctcgctcgcaag
catgacggcgccgatgtcgtcatcgtcaatacctgtggcttcctcgacagcgccaagcag
gagtcgctcggtgcgatcggcgaggccatggcggtcaacggcaaggtgatcgttaccggc
tgcatgggcgccgagcccgagcagatcgaggccgcctatcccaacgtgctgtcgatcacc
ggcccacagcaatatgaaagcgtgctggaggccgtgcaccgcgcgctgccgccggtgcac
aatccgcatatcgacctcgtccccccgcagggtatcaagctgacgccgcggcactacgcc
tatctcaagatttccgaaggctgcaacaaccgctgcactttctgcatcatcccgaagctg
cgcggcgatctcgtgtcgcgctcggcaaaggatgtgctgctcgaggccgagaaactcgtg
aaggccggcgtcaaggaactgctggtggtctcgcaggacacctcggcctacggcgtcgat
atcaaatatgccgagagtccgtggaaggatcgtagcgtccgcgcaaaattctacgacctc
gccaaggagctcggcgaactcggcgcctgggtgcgcctgcaatatgtctatccctacccg
catgtggatgaggtcatcggattgatgactccgaccagcaatatcctcccttatctcgac
atccccttccagcacgccgctcccaatgtcttgaaggccatgaagcgcccggcgtcgcaa
gacaagacccttggccgcatcaaggcctggcgcgagcagtgtcccgatcttgtgctgcgc
tcgaccttcatcgtcggcttccccggcgagaccgaggatgatttccagtatctgctcgac
tggctggacgaagcacagatcgatcgcgtcggcgcattcaaatatgagccggtggcggga
gcggcgtccaacagcatcggtctcgatgtgccggacgagctgaagcagcagcgctggaac
gcgctgatggagcgccagcagaagatttcggcacgccgtctcaagcgcaaggtcgggacg
cggcagcaggtgatcatcgacgaggtcggcccgacggtatcgaaaggccgatcgaaagcc
gatgcaccggacattgacggtgcggtctatgtcaccgcccgccggccgttgaaggtcggc
gagatcgtcacggccaagattgagcgtgcggacaactacgatcttcacggcagcgtggcc
gggttctag
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