Rhodopseudomonas boonkerdii: E0H22_14345
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Entry
E0H22_14345 CDS
T07799
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E0H22_14345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbk02000
]
E0H22_14345
Transporters [BR:
rbk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E0H22_14345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UGV28996
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Position
3168612..3170336
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AA seq
574 aa
AA seq
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MHGQPALPADFRHMPYVNPDAPKGGRMAWGMLGTFDSLNPFIVRGIAVQQMRGYVMESLL
ARGQDEPFTLYGLLAESVETDDDRTYVTFRVNPKARFSDGKSVTAEDVLFSWQLLKERGR
PHFRQYFGKVTKAELQGPLTIRFDIKEADDRELPLILGLMPILPKHAVNPDTFEDTTMAP
PLGSGPYTVTHVRPGASVTMTRNPDYWGRDLPVNRGMWNFDEVRIDYYREANGMYEAFTR
GLYDFRVENEPLRWHEGYDFAAVKSGDVVRDSVTTGLPKPSEFLVFNTRRLVFSDIRVRR
ALTLLFDFEWINRNYFFDLYARSGGIFAGSELSAYGRPADDRERELLKPYAAQIPADIMD
GSYRLPLSDGSGRDRPALRTALALLKDAGYQLDKNVLRKASDRTPLSFEILVTTRDQERI
ALTYARDLKRAGITANIRAVDGVQFDQRRINYEFDMLPNRWDNSLSPGNEQAFYWGSEAA
DVPGTRNYMGAKNSAIDAMIAAMLQARERPAFVAAVHALDRAWMSGAYAIPLYNVREQWL
ARWNRIERPKATSLVGILPETWWARPSPAPPDRK
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcatggccagcccgccttgcccgccgatttccgccacatgccttacgtcaatccggat
gcccccaaaggcggccgcatggcatggggcatgctcggcacattcgatagtctgaacccg
tttatcgtgcgcggcatcgccgtgcagcagatgcgcggctatgtgatggagagcctgctc
gcccgcggccaggacgagcccttcacgctttatggccttctcgccgaaagcgtcgagacc
gacgacgatcgcacctatgtcacctttcgcgtcaatccgaaggcccgcttctccgatgga
aaatccgtcaccgccgaagacgtcctgttttcatggcagctgctgaaagagcgcggccgc
ccgcacttccgccagtactttggcaaggtcaccaaggccgaattgcagggtcccctgacc
atccgcttcgacatcaaggaggccgacgaccgtgaattgccgctgatcctcggcctgatg
ccgatcctgcccaagcatgcggtcaatcccgacaccttcgaggacaccaccatggcgccg
ccgctcggttcggggccgtatacggtgacccatgttcggcccggcgccagcgtcacgatg
acccgcaatcccgattactggggccgcgatctgccggtcaatcgcggcatgtggaatttc
gatgaggtccgcatcgactactaccgcgaggccaacggcatgtatgaggccttcacccgc
ggcctctatgatttccgggtcgagaacgaaccgctgcgctggcatgagggctatgatttt
gctgccgtgaaatccggcgatgtcgtccgcgacagcgtcaccaccggcctgccgaaacca
tcggagtttctggtcttcaacactcgccggctcgtgttctccgacatccgcgtccgtcgc
gcgctgacgctgctgttcgatttcgaatggatcaatcgcaactacttcttcgatctctat
gcgcgctcgggtggcatctttgcggggtccgaactctccgcctatggccgcccggccgat
gaccgcgagcgcgagctgctgaaaccgtatgccgcacagattcccgccgacatcatggat
ggcagctaccgccttcccctcagcgacggctccggccgcgaccgcccggccctccgcaca
gctctcgcgctgctgaaagacgcgggctaccagctcgacaagaacgtactccgcaaagca
tccgacagaacgccgctcagcttcgaaatcctggtcaccacccgcgaccaggagcgcatc
gccctgacctatgcccgcgatctcaaacgcgccggcatcacggcgaacatccgcgccgtc
gacggcgtgcagttcgaccagcgccgcatcaactacgaattcgacatgctgccgaaccgc
tgggacaactctctgtcacctggcaacgaacaggcgttctactggggctccgaagccgct
gacgttcccggcacgcgcaactacatgggcgcgaagaattcggccatcgacgccatgatt
gccgccatgctgcaagcccgcgagcggcccgcattcgtcgccgccgttcacgcgctcgac
cgcgcatggatgtccggagcttacgcgatccctctgtacaatgtgcgcgaacaatggctc
gcgcgatggaatcggatagaacgacccaaagccacttcgctcgtcggcatcctgccggaa
acctggtgggccagaccgtcgcctgctccgcccgaccggaaatga
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