Rhodopseudomonas boonkerdii: E0H22_16490
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Entry
E0H22_16490 CDS
T07799
Name
(GenBank) peptidase M15
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk00550
Peptidoglycan biosynthesis
rbk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E0H22_16490
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rbk01002
]
E0H22_16490
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbk01011
]
E0H22_16490
Enzymes [BR:
rbk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E0H22_16490
Peptidases and inhibitors [BR:
rbk01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
E0H22_16490
Peptidoglycan biosynthesis and degradation proteins [BR:
rbk01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
E0H22_16490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Motif
Other DBs
NCBI-ProteinID:
UGV27140
LinkDB
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Position
3633063..3634889
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AA seq
608 aa
AA seq
DB search
MLRTTFASSRTLRVCVLGLVTIGIAVAFTVDTADARRRHKGKAKSHVTRVSSYNPAFASI
IVDGNSGAVLQSTNPDALRHPASLTKIMTLYMLFEKLEQGKISLDSQMPVSQHASEQSPT
KLGLRPGQTLRVEDAIKGLVTRSANDAAVVIAEAIAGDEDDFAKLMTRKARALGMSRTVY
RNASGLPDDAQVTTARDQSVLGRAIQDRFPRYYRYFATASFNFRGRNIRNHNRLIGSVEG
VDGIKTGYTRASGFNLVSSMKRGNRHLVGVVLGGRSGGSRDAAMRTLLADNLEKGATRRT
VAAITERSPAEAATEVAEVEAKSRPTETKQVNGAIQVATATPPSAEPVATPEPAPRPAAA
AAVPSRSFLTAATAAVPPAAAPIPQARRPDTGSLNSGVIQSEPIATIPGSAEPMKPVRVR
TVQVKSGQYRVASASTETSAPAATNTVATSNEPPARSPETTNSLYARSEMPRQPAGHGTG
NGILGVLPASSVQHGGMAMAYAAPPAAAPAPAPQAVQQAGSIKPATAHSGWIIQVGALSS
ESEAQTRLDAARDSARGALGKADPFTETVGNGSRKLYRARFAGLDRDQAEAACKTLKRSD
IPCITIRN
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcacaacgtttgcttcgtcgcgcacccttcgtgtgtgcgtactggggcttgtc
accatcggcattgccgtcgccttcacggtcgatacggcggatgcccgccggcggcacaag
ggcaaggcgaagagccacgtcacccgcgtctccagctacaaccccgctttcgcttccatc
atcgtcgatggcaattccggcgccgtcctgcaatcgaccaatccggacgcgctgcgccat
ccggcctcgctcaccaagatcatgacgctgtacatgctgttcgagaagctcgaacagggc
aagatttcgctcgatagccagatgccggtctcgcagcacgcttcggagcaatcgccaacc
aagcttggcctgcggcccggccagacgcttcgcgtcgaggacgccatcaagggtctcgtc
acccgttcggccaatgacgccgccgtcgtgatcgccgaagcgatcgccggcgatgaagac
gatttcgccaagctgatgacccgcaaggcccgcgcgctcggcatgagccgcaccgtctat
cgcaacgcctcaggcctgcccgacgatgcgcaggtcaccaccgcccgcgaccagtcggtg
ctcggccgcgccattcaggatcgcttcccgcgctactatcgctacttcgccacggcctcg
ttcaatttccgtggccgcaacatccgcaaccacaatcgcctgatcggctcggtagaaggc
gtggacggtatcaagaccggctatacccgcgcctccggcttcaacctcgtctcctcgatg
aagcgcggcaaccgccaccttgtcggcgtggtgctcggcggccgcagcggcggctcgcgc
gacgccgccatgcgcacgttgctcgccgacaatctcgaaaagggcgccacccgccgtacc
gtcgcggccatcaccgagcgcagtccggcggaagctgccaccgaggtcgccgaagtcgag
gcaaaatcgcgccccaccgaaacgaagcaggtcaatggtgctatccaggtcgccaccgcc
actccaccttcagcggagcctgttgccacgcctgaacccgcccctcgccctgctgccgcc
gcagccgtccccagccgctctttcctgaccgccgcaaccgccgccgttccgcccgccgcc
gcgccgataccgcaggcccgcaggcccgataccggctcgctcaatagcggcgtgatccag
tccgaaccgattgcgaccattccgggatccgccgagccgatgaagccggtccgcgtccgc
accgttcaggtgaagtcgggtcagtaccgtgtcgcctcggcgagcaccgaaacgtcggct
ccggcagcgaccaacaccgtcgcaacctcgaacgagcctccggcccgctctcccgagacc
accaattcgctctatgcccgctcggagatgccgcgccagccggccggccacggcaccggc
aacggtatcctcggcgtgctgccggcctccagcgtccagcatggcggcatggccatggcc
tatgccgctccgccggcagcagctccggcccctgccccacaggccgtgcagcaggccggc
tcgatcaagcccgccacggcgcattccggctggatcattcaggtcggcgcgctcagcagc
gagagcgaagcccagacccggctcgacgccgcccgcgacagtgcgcgcggcgcgctcggc
aaggccgatcctttcaccgagaccgtcggtaacggctcgcgcaagctctaccgcgcccgc
ttcgccggcctggaccgcgatcaggcggaggccgcgtgcaagacgctgaagcgctcggac
attccctgcatcaccatcaggaactga
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