Rhodopseudomonas boonkerdii: E0H22_16590
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Entry
E0H22_16590 CDS
T07799
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rbk
Rhodopseudomonas boonkerdii
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rbk03009
]
E0H22_16590
Enzymes [BR:
rbk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
E0H22_16590
Ribosome biogenesis [BR:
rbk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E0H22_16590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UGV27158
LinkDB
All DBs
Position
complement(3655231..3656709)
Genome browser
AA seq
492 aa
AA seq
DB search
MSRRDTKSPAKRGTGGGGRSGRAKPGATMAKAAAKKAAKGPARTPPKGAMAKGERFRTER
GDTERPTSARPPRARVAERGERFERSERPERFERSERPERFERSERPQRFERSERPERSE
RSSAARTGSKAPTRFAGGPSRSRKPEPVVEKPAKAKAEPASMPTGVQTVTVTPDENDMRV
DRFLEARFPGLSFSHIQRIVRKGELRVNGKRADSKDRLKTGQTVRIPPLKLDAPKVGGVL
SEAAQKTLDALKEMTIYEDPDVLVLNKPAGLAVQGGSGMTRHVDMMLEVMRDSKGQKPRL
VHRLDRETSGCLLIAKTRFAASFLTGAFRERSARKMYWALVAGVPKPKQGRISTYLAKEE
NEEDTIMRVAKHGDEGASHAVTYYAVVETSGQKLSWVSLKPVTGRTHQLRAHMAHIGHAI
VGDPKYFNIENWQLPGGLQNRLHLLARRIVIPHPRGGVIDATAPLPPHMLQSWNLLALDH
DRFDPIENAPED
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcgcgatacgaaatcccccgccaaacgcggcaccggaggcggtggccgttcg
ggacgcgccaaaccgggcgccacgatggccaaggcggcggcgaagaaggcggccaagggg
cctgccagaacgcctccgaagggcgccatggcgaagggcgaacgcttccggaccgagcgc
ggcgatacggaacgacccaccagtgcacgcccgccgcgcgcacgtgtggctgagcggggc
gagcgctttgaacggtctgagcgaccggagcggtttgagcgttctgagcgcccggaacgt
ttcgaacgatctgagcgcccgcaacgctttgagcgatccgaacgcccggaacggagcgag
cggtcatccgctgcacgcaccggaagcaaggcgccgacgcgcttcgcaggcggtccgtcg
cgttcacgaaagcccgaacccgtggtcgagaagcctgccaaggcaaaggccgagcctgcc
tcgatgccgaccggcgtgcagaccgtgactgtcacgcccgacgagaacgacatgcgtgtc
gatcgcttcctcgaagcgcggtttcccggcctgtcattctctcatatccagcgcatcgtc
cgtaagggggagctgcgtgtgaacggcaagcgcgccgacagcaaggatcgtctcaagacc
ggccagactgtccgcattccgccgctcaagctcgatgcgccgaaggtcggcggggttctc
tcagaagccgcgcaaaaaacgctcgacgcgctcaaggagatgacgatctacgaagatccc
gacgtgctggtgctgaacaagccggccggccttgccgtgcagggcggttcgggcatgacg
cgccacgtggacatgatgctggaggtgatgcgcgactccaagggacagaagccgcgcctc
gttcaccgtctcgacagggaaacgtcgggctgtttgctgattgccaagacgcgcttcgcc
gcgtccttcctcaccggcgcttttcgtgagcgttcggcgcgaaagatgtattgggcactg
gtggcgggagtgccgaaaccgaagcagggacgtatctcgacctatctcgccaaggaagag
aatgaggaagatacgatcatgcgcgtcgccaaacatggcgacgagggcgcgagccacgcg
gtcacgtattatgcggtggtcgaaacgtccggccagaagctttcctgggtgtcgctgaag
ccagtgaccggacggacccatcaactccgtgcgcacatggcgcatattggccacgctatc
gtcggcgatcccaaatatttcaatatcgagaactggcagttgcccggcggtctgcagaac
cgcctgcatctgctcgcacgtcgtatcgtcatcccgcatccgcgtggcggggtgatcgat
gcgaccgcgccgctgccgccgcatatgctgcaatcatggaatctcctcgcgctcgatcac
gatcggttcgacccgatcgaaaacgcgccggaagactag
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