Rhodopseudomonas boonkerdii: E0H22_17075
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Entry
E0H22_17075 CDS
T07799
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E0H22_17075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbk02000
]
E0H22_17075
Transporters [BR:
rbk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
E0H22_17075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA
Rad17
SMC_N
AAA_5
AAA_16
IstB_IS21
ORC-CDC6-like
RsgA_GTPase
CysA_C_terminal
AAA_14
NACHT
AAA_28
AAA_25
ABC_ATPase
AAA_22
DUF4402
AAA_30
ATPase_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UGV27247
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All DBs
Position
complement(3757386..3758447)
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AA seq
353 aa
AA seq
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MNSTISHGAAVHVVNCGKTFPDGTQALSPASLDIVAGETLVLLGPSGCGKTTMLRIIAGL
ETPDAGGRILFDKNDVTTTPIEQRHVGMVFQSYALFPNMTVADNIGYGLKIRGVGKAERE
ARVAEMVALTNIGGLENRRIDQLSGGQRQRVALARAVAVRPRVLLLDEPLTALDASLRDR
LRSELNRLLRELGITAIYVTHDQAEAMELGDRIVVMRKGAIAQIGTPREVYFEPQNRFVA
EFVGAANIIEGPVAGGRLALPGGWLALNDVVDTAAAVAVIRPETIGIVSEGDAFLRGNVE
SVSFIGDRQRVIVTGAANRPLTVDAPNRINVRAGDRVGLQIAPDAVRVLPKED
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcaccatctcgcacggcgccgccgtgcatgtcgtcaattgcggcaagactttt
ccggacggcacgcaagcgctgtcgccggcctcgctcgatatcgtcgccggcgagacgctg
gtgctgctcggcccctccggctgcggcaagaccacgatgctgcgcatcatcgccggcctc
gagacgcccgacgcgggcggtcgcatcctgttcgacaagaacgacgtgacgacgacgccc
atcgagcagcgtcatgtaggcatggtgttccagtcctatgcgctgtttcctaacatgacc
gtggccgacaatatcggctatggcctcaagatccgcggcgtcggcaaggcggagcgcgaa
gcgcgcgtcgccgagatggtggcgctcaccaatatcggcgggcttgaaaaccgccgcatc
gaccagttgtccggcggccagcgtcagcgcgtggcgctcgcacgtgcggtcgcggtccgt
ccgcgcgtgctgctgctcgacgagccgctgactgcgctcgatgcctcgctgcgcgaccgc
ctgcgcagcgagctcaaccgattgctgcgtgagcttggcatcaccgcgatctatgtgacc
cacgatcaggccgaggccatggagcttggcgaccgcatcgtggtgatgcgcaagggcgcc
atcgcccagataggcacgccgcgcgaagtctatttcgagccgcagaatcgcttcgtcgcc
gaattcgtcggcgctgccaacattatcgaggggccggtcgcgggcgggcggctggcgttg
cccggcggctggctcgcgctcaacgatgtggtcgacacggccgcagcggtggcggtgatc
cgcccggaaaccatcggtatcgtctccgaaggcgacgcgtttctgcgcggcaatgtcgag
agcgtcagcttcatcggcgaccgccagcgtgtcatcgtgaccggtgcggcgaaccggcca
ttgacggtggacgcgccgaacaggatcaatgtgcgggcaggggaccgcgtcggcctgcag
atcgcgccggatgccgtgcgcgtgttgccgaaagaagattga
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