Rhodopseudomonas boonkerdii: E0H22_17865
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Entry
E0H22_17865 CDS
T07799
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rbk
Rhodopseudomonas boonkerdii
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbk03400
]
E0H22_17865
DNA repair and recombination proteins [BR:
rbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
E0H22_17865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_30
AAA_10
ResIII
T2SSE
Hydrolase
AAA_16
TrwB_AAD_bind
AAA_25
P-loop_TraG
AAA_7
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UGV27384
LinkDB
All DBs
Position
complement(3918880..3920505)
Genome browser
AA seq
541 aa
AA seq
DB search
MAPSTASSTAGDTDKQIFIGKGDHEAWLTLALGNRHGLVTGATGTGKTVSLQVMAEGFAR
AGVPVFAADIKGDLSGIAEVGEGKDFILQRAKEMGLTFQPDQFSTIFWDVFGEQGHPVRA
TVSEMGPLLLARLLDLNDVQEGVLNVAFRVADENGLTLLDMKDLRSLLDAIVPKPVKKDE
VDPLAEIRASASSFGNVSKATVGTIQRQLLVLENQGGDKFFGEPALELKDFLRTDRDGRG
MVNILVADKLMASPRLYATFLLWLLSELFEELPEVGDLPKPKLVFFFDEAHLLFNDAPKA
LMDKIEQVVRLIRSKGVGVYFVTQNPIDVPDRVLAQLGNRVQHALRAFTPRDQKAVAAAA
DTFRANPKLDTATAITELGKGEALVSFLEGNGTPAMVQRVMVRPPTARIGPITPEERKAI
LNASPVKGKYDTAVDSDSAYEMLQRRVAGNAATPAEAGTAGPDGGGFLGTLGGIVGSIFG
TNTSRGRLTTGQVIARSVTRSVTNKVVGGIVANVGKQVGGSLGSSIGREIVRGALGGIMK
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgagcacggcaagttcgacagcgggcgataccgacaagcagattttcatcggc
aagggtgaccacgaagcctggctgacactggcgctcggaaatcgccacggcctggtcacc
ggcgcgacgggaaccggtaagacagtatcgcttcaggtgatggccgaaggctttgcccgc
gcaggtgttccggttttcgcagcggatatcaaaggcgatctgtccggcatcgccgaagtg
ggcgagggcaaggacttcatcttgcagcgtgcgaaggagatggggctgacttttcagccc
gatcagttctcgacgattttctgggacgtgtttggcgagcagggccatccggttcgcgct
acggtttcggagatggggccactgcttttggcgcggctgctcgatctcaacgatgtgcag
gaaggcgtgctcaatgtcgcgtttcgcgtcgccgacgagaatggcctgacgctgctcgac
atgaaggacctgcgttcgctgctcgatgcgatcgtgccgaagcccgtcaagaaggatgag
gtcgatccgctcgccgagatccgcgcctccgcatccagcttcggcaatgtctccaaggcg
acagtcggcaccatccagcggcaattgcttgtgctggagaaccaggggggcgataaattc
ttcggcgagcccgcgctggagctgaaagattttctcaggaccgatcgcgacggccgcggc
atggtcaacatccttgtcgccgacaagctgatggccagcccccgcctctacgcgaccttc
ctgttgtggctgctgtcggaactgttcgaggagttgccggaagtcggcgacctgccgaag
ccgaagctggtgttcttcttcgacgaggcgcacctgctgttcaacgatgcgccgaaagcc
ctcatggacaagatcgagcaggtggttcgtctcatccgttcgaagggcgtcggtgtgtat
tttgtcacccagaatccgatcgatgtgcccgatcgcgtactcgcgcagctcggcaaccgc
gtacagcatgccttacgcgccttcacgccgcgcgaccagaaagcggtggctgctgctgcg
gacaccttccgtgccaatccgaagctggatacggcaacggccatcaccgaactcggcaag
ggcgaagcgctggtatctttccttgaagggaatggtacgccggcgatggtccagcgcgtg
atggtccggccgcccacggcgcgcatcgggccgattacgccggaggagcgtaaggcgatc
ctcaatgccagcccggtgaagggcaaatacgacaccgcggtggattcggattctgcctac
gagatgctgcaacggcgtgtcgcgggcaatgcggcgacgccggccgaggccggaacggca
gggcccgacggcggcggtttccttggcacgctcggcggcatcgtcggcagcatcttcggt
accaatacgtcgcgcggccggctcaccaccggacaggtgatcgcacgcagcgtcacgcgc
tccgttaccaacaaggtggtcggcggtatcgttgccaatgtgggcaagcaggtcggcggt
tcgctcggcagctccatcggccgcgagatcgtacgcggcgcgctgggcgggatcatgaag
cgctga
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