Rhodopseudomonas boonkerdii: E0H22_19990
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Entry
E0H22_19990 CDS
T07799
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E0H22_19990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbk02000
]
E0H22_19990
Transporters [BR:
rbk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E0H22_19990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_16
AAA
Mg_chelatase
AAA_5
Sigma54_activat
AAA_29
nSTAND1
NACHT
DUF3987
RsgA_GTPase
AAA_19
FtsK_SpoIIIE
PRK
Zeta_toxin
MTBMA_p00010_2nd
PhoU
Motif
Other DBs
NCBI-ProteinID:
UGV27758
LinkDB
All DBs
Position
complement(4395123..4396742)
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AA seq
539 aa
AA seq
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MTKAPAVAIKNLKIALPKSAERPYAVDGVSIDLIPGEIVCVVGESGSGKSMCAHALMGLL
PDTVKTEAGEISFEGKDLLKFGEDQWRDVRGRGIAMVFQEPMTALNPLMRIGDQMMEMFE
AHGLLTPKERRAKALNLAKEVGLPDPERIIRAYPHQLSGGQRQRAMIAMALALEPSVLVA
DEPTTALDVTTQAQILKLIRNLQRSRNMAVMFITHDFGVVADIADRVVVLRHGKIVEEGS
IDAVFRNPQHDYTKALLAAVPSMDPPARAPLDETNKAVDVIGLDKTYVTPQGWFKPDRRV
QAANEVTFSVLKGETVGLVGESGSGKSSVARLVMRLIEADRGTVRIGDIDLTALEGRALR
DQRHRIQMIFQDPFASLNPRRKVGQIISDGPIARGTSPKVAMDRARDILGMVGLDAGALE
RYPHEFSGGQRQRIGIARALAMDPEIIVADEAVSALDVSVQAQVLKLLEDLKARLGLSML
FITHDLRVAAQICDRIAVMQRGEIVELKPTAQLFAAPEHPYTRELLGAVPGQSSPSQAA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagcgcccgctgttgccattaaaaatctgaagatcgcgctgccgaagagcgcg
gaacgtccttacgccgtcgatggtgtgtccatcgatcttattccgggcgaaatcgtttgc
gtcgtcggcgagtccggctccggcaagtccatgtgcgcgcatgcgctgatgggcctgttg
ccggacaccgtgaagaccgaggccggcgagatttccttcgagggcaaggatcttctgaag
ttcggtgaggaccagtggcgtgacgtgcgaggccgcggcatcgccatggtgtttcaggag
ccgatgacggcgctcaatccactgatgcggatcggcgaccagatgatggagatgttcgag
gcccatggcctgctgacgccgaaggagcgccgcgccaaggcactcaatctggcgaaggag
gtcggtctgcccgatcccgagcgcatcatccgcgcctatccgcaccagctctccggtggc
cagcgccagcgcgccatgatcgccatggcgcttgccctggagccctcggtgctggtggcg
gacgagcccaccactgctctggacgtcaccacgcaggcgcaaattctcaaactgatccgc
aacctgcagcgcagccgtaacatggcggtgatgttcatcacccacgatttcggtgtcgtc
gccgatatcgccgaccgcgtcgtcgtgctccgtcatggcaaaatcgtggaggaaggctcg
atcgatgccgtgttcaggaatccgcagcacgattacaccaaggcgctgctcgccgccgtg
ccgtcgatggaccctcctgcgcgcgcaccgctcgacgagaccaacaaggctgtcgatgtc
atcggcctcgacaagacctatgtgaccccgcagggctggttcaagccggatcgtcgcgtg
caggccgcgaatgaggtgacgttctcggtcctcaagggtgagactgtcggtcttgtcggt
gagtccggttccggcaagtcctcggtcgctcgtctggtgatgcgcctgatcgaggccgat
cgcggcacagtccgcatcggcgatatcgatctcaccgcgctggaaggccgtgcgctgcgc
gaccagaggcatcgtatccagatgatcttccaggatccgttcgcctcgctcaatccgcgc
cgcaaggtcggccagatcatcagcgacggcccgattgcccgcggcaccagtccgaaggtc
gcgatggaccgtgcgcgtgacattctcggcatggtcggcctcgatgccggcgcgctcgaa
cgctatccgcacgaattctccggcggccagcgtcagcgcatcggcattgcccgcgcgctc
gccatggacccggagatcatcgttgccgacgaggcggtgtccgcgctcgacgtgtcggtg
caagcgcaggtgctgaagctgctcgaggacctcaaggcacgtctcggcctgtccatgctg
ttcatcacccacgatctccgcgtcgccgcccagatctgcgaccggatcgcggtcatgcag
cggggcgagatcgtcgaactgaagccgacggcgcagctgtttgccgcgccagaacatccc
tatacccgcgaactgctcggtgccgtccccggccagagctcgccatcgcaggcagcctga
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