Rhodopseudomonas boonkerdii: E0H22_20565
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Entry
E0H22_20565 CDS
T07799
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk00061
Fatty acid biosynthesis
rbk00071
Fatty acid degradation
rbk01100
Metabolic pathways
rbk01212
Fatty acid metabolism
rbk02024
Quorum sensing
rbk04146
Peroxisome
Module
rbk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E0H22_20565 (pimA)
00071 Fatty acid degradation
E0H22_20565 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E0H22_20565 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
E0H22_20565 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rbk01004
]
E0H22_20565 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbk04147
]
E0H22_20565 (pimA)
Enzymes [BR:
rbk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E0H22_20565 (pimA)
Lipid biosynthesis proteins [BR:
rbk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E0H22_20565 (pimA)
Exosome [BR:
rbk04147
]
Exosomal proteins
Exosomal proteins of breast milk
E0H22_20565 (pimA)
Exosomal proteins of breast cancer cells
E0H22_20565 (pimA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UGV27860
LinkDB
All DBs
Position
complement(4522470..4524161)
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AA seq
563 aa
AA seq
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MTYSYPGEKYYPKGLRWDAPIARGTLPGLLADAARDYGARTAIEFRGKPISFIELQGRAD
AAAASFMRAGYGRDATIALFLGNTPDHPVNFFGALKAGARLVHLSPLDGEIALSHKLKDS
GARVLVTSNLAALLPMALKFFDKGLLDKLIVCEDDDWGAIGTQQLPLPDNSKIVTFRNFT
ADAKPLSEWPNISPDDVALLQYTGGTTGLPKGAMLSHGNLTSAVSIYNVWAEPSRAERNR
IERVICTLPLFHIYALTVILLGRISVGDTISLHQRFDVTSVLDDIEEKKATVFPGVPTMW
IAIAADPSLETRDLSSLAVAGSGGAPLPVEVARLFERKTGLKLKSGWGMTETCSPGTGHP
AEGPDKPGSIGLALPGIELDVVSLEDPSQVLGIGETGEIRIKGPNVTKGYWNRQQETAEA
FVGDRFLTGDIGYMDEDGYFYLVDRKKDMIISGGFNVYPQMIEQAIYTHPSVQEVIVIGV
KDAYRGEAAKAFITLRKGAEPFTIDDLRAFLTGKLGKHELPAAVEFLSELPRTPVGKLSR
HALRDQLAMPTLDQQQTASGGRP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacgtattcttacccaggcgagaaatactaccccaaaggcctgcgctgggatgcaccg
attgcgcgcggcaccttgccgggcctgctagccgatgccgctcgtgactacggtgcccgc
acagcgatcgaattccgcggcaaaccgatctccttcatcgagctgcaaggtcgtgcagat
gccgccgcagccagttttatgcgtgcgggctatggccgcgatgcgaccatcgcgctgttc
ctcggcaacacgccggatcatcccgtcaatttcttcggcgcactgaaagccggtgctcgc
ctcgtgcatctttcgccgctcgatggcgagatcgcgctgtcgcacaagctgaaggactcc
ggcgcgcgcgtgcttgtgacaagcaatcttgccgcattgctgccgatggcactcaaattt
tttgacaagggcctgctcgacaagctcattgtctgcgaggacgacgactggggagcgatc
ggcacccagcaactgcctctgccggataattcaaagattgtcaccttccgcaatttcact
gccgacgccaagccgctttccgagtggccgaacatctcgccggacgacgtagcgctgctg
caatataccggcgggactaccggtctgccgaaaggcgcgatgctcagccacggcaatctg
acttcggctgtttcgatctacaatgtgtgggcggagccatcccgcgccgaacgcaaccgc
attgaacgtgtcatctgcacactgccgttgtttcacatctatgcgctgacggtgatcctg
ctcggccgcatcagtgtcggcgacaccatctcgctgcaccagcgtttcgatgtcaccagc
gtgctcgatgacatcgaggagaagaaggcgacggtattccctggcgttcccaccatgtgg
attgccatcgccgccgatccctcgctggagacacgcgatctgtcatctctcgctgtcgca
ggctccggcggtgcgccgttgccggtggaagtcgcgcggttgttcgagcgtaagaccggc
ctcaagctcaagagcggatggggcatgaccgagacctgctcacccggtaccggtcatccc
gccgaaggccccgacaagcccggctccatcggccttgcattgcccggtatcgagctcgat
gtcgtctcgctggaagatccctcgcaagtgcttggcatcggcgagaccggcgagattcgc
atcaaggggccgaacgtcacgaagggatactggaatcgccagcaggaaaccgcggaagcc
tttgtcggcgatcgctttcttaccggcgatatcggctacatggacgaagacggctatttc
tatctggtcgatcgcaagaaggacatgatcatctccggcggtttcaatgtctatccgcag
atgatcgagcaggcgatctacacccatccgtccgtgcaggaagtcatcgtcatcggtgtg
aaggacgcctatcgcggcgaagccgcgaaggcgttcatcactctgcgcaagggcgccgaa
cctttcaccatcgacgatctgcgtgcattcctcacaggcaagctcggcaagcatgaattg
ccggctgccgtggagttcctgagcgaattgccgcgcacgccggtcggaaaactgtcgcgc
catgccttgcgtgatcagctcgccatgcccacactcgatcaacaacaaaccgcatccgga
ggacgcccatga
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