Rhodopseudomonas boonkerdii: E0H22_22335
Help
Entry
E0H22_22335 CDS
T07799
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
rbk
Rhodopseudomonas boonkerdii
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rbk03036
]
E0H22_22335 (xerD)
Chromosome and associated proteins [BR:
rbk03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
E0H22_22335 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
UGV28178
LinkDB
All DBs
Position
4903475..4904431
Genome browser
AA seq
318 aa
AA seq
DB search
MSTPSDARLSALFLDMLAAEQGAGQNTLDAYRRDLEDFSTFAVRAKASFGTADTQLLRDY
LEDLDDRGFKSTTVARRLSALRHLFRFLLSENIRTDDPAAILSGPKRGRSLPKVLSIADV
DRMLMQARSMARNAEMTLPQRLRHARLYCLLEVLYATGLRVSELVSLPVTAARRDARMIV
VRGKGNKERMVPLNETAKTAMADYLVVMAEAQKTQPKKSAPSKWLFPSFGESGHLTRQHF
ARDLKDLASAVGIAPRLVSPHVLRHAFASHLLHNGADLRIVQTLLGHTDISTTQIYTHVV
EERLKSLVRDLHPLAETS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccccatccgacgcccgcctttccgccctgttcctcgatatgctcgccgccgaa
cagggcgccggccagaacacgctcgacgcctatcgccgcgacctcgaggatttttccacc
ttcgccgtccgcgccaaggccagtttcggaacggccgacacccagctcctacgcgactat
ctcgaagatctcgacgatcgcggcttcaaatcgaccaccgttgcgcgccgactgtcggcg
ctgcgccacctgtttcggttcctcctgagcgagaacatccgcaccgacgacccggcggcg
atcctatccggccccaagcgcggtcgcagcctaccgaaagtgctgtcgatcgcggatgtc
gatcgcatgctgatgcaggcccgcagcatggcccggaacgcggaaatgacgctcccgcag
cggctgcgtcatgcgcggctgtattgcctgctcgaagtcctttacgccaccggacttcgc
gtgtccgaactcgtttcgctccccgttaccgccgcccgccgcgatgcgcgcatgattgtc
gtgcgcggcaagggcaacaaggaacgcatggtgccattgaacgagacggccaagacggcg
atggcggactatctcgtcgtgatggcggaggcgcagaaaacccagccgaagaagagcgcc
ccatcgaaatggctattcccgtcgttcggcgaaagcggccatctcacccgccagcacttc
gcgcgtgatctgaaggacctcgccagcgcggtcggcatcgcgccgcgcctggtatcgccg
catgtgctacgccacgcctttgccagccacctgctgcataacggcgccgacctgcgcatc
gtgcagacattgctaggccacaccgatatttcgacgacgcaaatctacacccatgtggtg
gaagagcggctgaaaagcttggtgcgggacctgcatccgctggcggagacaagctga
DBGET
integrated database retrieval system
