Pseudogemmobacter blasticus: B6K69_00620
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Entry
B6K69_00620 CDS
T05669
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rbl
Pseudogemmobacter blasticus
Pathway
rbl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B6K69_00620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbl03400
]
B6K69_00620
Enzymes [BR:
rbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
B6K69_00620
DNA repair and recombination proteins [BR:
rbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
B6K69_00620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AWD20339
LinkDB
All DBs
Position
complement(129219..129998)
Genome browser
AA seq
259 aa
AA seq
DB search
MKIASFNINGIKARIEALPRWLEAARPDVVCLQEIKSQDESFPRELFEDMGYRVETHGQK
SFNGVAILSKLPLEDVTRGLPGDEGDEQARWIEATVIGARAVRVCGLYLPNGNPAPGPKF
DYKLGWMARMEARVKALLSTEEPVIFLGDYNVIPQPQDAAKPEAWVEDALFRPESRAAFR
RLVNLGLTDAIRTLDPRPGIYTFWDYQANSWERGNGIRIDHLLLSPQAADLLEEAGIDKD
TRAGDKPSDHVPVWVDLAA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccagcttcaacatcaacggcatcaaagcgcggatcgaagccctgccccgc
tggctggaagccgcccgccccgatgtggtctgcctgcaggaaatcaagagccaggacgag
tcgttcccacgcgagctgttcgaggacatgggctatcgcgtcgaaacccatgggcagaaa
tccttcaatggcgtggcgatcctgtcgaaacttccgctggaagacgtaacccgtggcctg
cccggcgacgagggcgacgaacaggcgcgctggattgaggcgactgtgatcggggcccgc
gcggtgcgggtctgcggcttgtacctgccgaacggcaaccccgcaccgggccccaagttc
gattacaaactgggctggatggcccggatggaagcgcgggtgaaggcgctgctgtccacc
gaggaacctgtgatcttccttggcgattacaacgtgatcccgcagccgcaagatgccgca
aagcccgaggcctgggttgaagatgcgctgttccgacccgaaagccgcgccgcctttcgc
cggctggtcaaccttggcctgaccgacgcgatccgaaccctcgacccgcggccggggatc
tataccttctgggactatcaggcgaattcctgggaacgcggcaacggcatccgcatcgac
cacctgctgctgtcgccgcaggccgcagacctgctggaagaggcgggcatcgacaaggac
acgagggcgggtgacaagccatccgatcatgtcccggtctgggtcgatctggccgcctga
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integrated database retrieval system
