Pseudogemmobacter blasticus: B6K69_07320
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Entry
B6K69_07320 CDS
T05669
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rbl
Pseudogemmobacter blasticus
Pathway
rbl03030
DNA replication
rbl03430
Mismatch repair
rbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B6K69_07320
03430 Mismatch repair
B6K69_07320
03440 Homologous recombination
B6K69_07320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbl03032
]
B6K69_07320
03400 DNA repair and recombination proteins [BR:
rbl03400
]
B6K69_07320
Enzymes [BR:
rbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B6K69_07320
DNA replication proteins [BR:
rbl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B6K69_07320
DNA repair and recombination proteins [BR:
rbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B6K69_07320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
AWD21507
LinkDB
All DBs
Position
complement(1518535..1522038)
Genome browser
AA seq
1167 aa
AA seq
DB search
MATSPRFIHLRTHTEHSLLEGAVPVKKLVKLAAAAQMPAIAVTDTNNMFCALEFSSHAKD
AGLQPIVGCQISLAHDPAAPGERPRLPAPLVLLAQSEAGYMNLMKLNSCLYLRGDGQLPH
VTAEELERHSAGLICLTGGPDGPLGRFLQAGQVPKARALLARLAAAFPQRLYVELQRHPG
EGGRLPAAEATSERGLVELAYELGLPLVATNDVYFPEAKMYQAHDALICIAEGAYVDQME
PRRKLTPQHYFKSEAEMCALFADLPEALENTVEIARRCAFMASKRKPILPRFAEDEVEEL
RRQAWEGLDRRLAVIPMAAPREEYEARLKFEIDIIEKMGFPGYFLIVSDFIKWAKAQGIP
VGPGRGSGAGSLVAYALTITDLDPLRYALLFERFLNPERVSMPDFDIDFCMDRREEVIRY
VQERYGREKVAQIITFGALLSKAAVRDVGRVLQLPYGQVDRLSKMIPVEGVKPVSITKAL
ADEPRLREAAKEEVVGRLLDYAEKIEGLYRNASTHAAGVVIGDRPLDELVPLYQDPRSDM
PATQFNMKWVEAAGLVKFDFLGLKTLTVIQNAIALILKSGRPLHVAQDGRTLYEPKPGAE
NDIGHIPLDDKATYDLYAAARTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGLREIEPLHPTIDHILKETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIAEEMAKERPKFIEGCTKTHGIDPKKSGEVFDLLEKFANYGFNKSHAAAYAVVSY
QTGWLKANHPVEFMAGVMNCDIHLTDKLAVYKRELDKLGIEVVPPCVNRSLATFDTGQGR
VIYALGALKNVGVDAMRLIVEARRTEAGDKPFATLFDFARRCDLKRIGKRPLEMLARAGA
FDQLDPNRARVFEALDPLVAFSAAIHEAQASNQVSLFGDSGSDIPEPRLPWRDDWLPVER
LSNEHLAIGFYLSGHPLDDYMSALKRKDVKTLAELTQTVMARGAPMVAKLAGSVAARQER
KSAKGNRFAFVSLSDPTGLYEVTVFSDVLEVARDLLEPGRNVVLTVRADPDGEGVKLLAN
SVAPIDAVADQAGARPIRIHLNRPEAVTSVANLLGQVEGKTRAQITLCVADAQGREIDLT
LPQAYPVTPQIRGAIKAMQGVVLVEEI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggccacatccccccgattcatccacctccgcacccataccgagcacagccttctggaa
ggggcggtgcccgtgaagaagctggtcaagctggcggcggcggcgcagatgcccgccatc
gcggtgaccgataccaacaacatgttctgcgcgctggagttttccagccacgccaaggat
gccgggctgcaacccattgtcggttgtcagatcagtctggcgcatgatccggccgcgccc
ggagaacggccgcgcctgcccgcgccgctggtgctgctggcgcagtccgaagcgggctac
atgaacctgatgaagctgaactcctgcctttacctgcggggcgacgggcagttgccgcat
gtcacggccgaagagctggagcgtcattccgccggcctgatctgcctgaccggcggcccc
gacggccccttgggccgcttcctgcaggccggccaggtgcccaaggcgcgcgccctgctg
gcgcggctggccgcggcctttccgcagcgcctgtatgtcgaattgcagcgccaccccggc
gagggcgggcgtctgcccgccgccgaggccacgtccgaacgcgggctggtcgagctggcc
tatgagctgggcctgccgctggttgcgacaaacgatgtctatttccccgaagcgaagatg
tatcaggcgcatgatgcgctgatctgcatcgccgaaggcgcctatgttgaccagatggag
ccgcgccgcaagctgacgccgcagcactacttcaagtccgaagccgagatgtgcgccctg
ttcgccgatctgcccgaggcgctggaaaacacggtcgagatcgcccgccgctgtgccttc
atggcgtcaaagcgcaagccgatcctgccgcgcttcgccgaggatgaggtcgaggagctg
cgccgccaggcctgggaagggctggaccgccgccttgccgtcattccgatggccgcgccg
cgcgaagagtatgaagcccgcctgaagttcgaaatcgacattatcgagaagatgggcttc
cccggatacttcctgatcgtgtccgatttcatcaaatgggccaaggcacagggcatcccg
gtcggcccgggccgggggtcgggggcgggctcgctggtggcctatgcgctgaccatcacc
gaccttgatcccctgcgctatgcgctgcttttcgaacgcttcctgaaccccgagcgggtc
tcgatgcccgacttcgacatcgacttctgcatggatcgccgcgaagaggtgatccgctat
gtgcaggaacgctatggccgcgagaaggtggcgcagatcatcaccttcggcgcgcttctg
tccaaggccgccgtgcgcgacgtgggccgcgtgctgcaattgccctatggccaggtggac
cgcctgtccaagatgattccggtggaaggggtgaagcccgtctccatcaccaaggcgctg
gccgacgaaccccgcctgcgcgaggcggcgaaggaggaagtggtcggccggctgctggac
tatgccgaaaagatcgaagggctttaccgcaacgccagcacccacgccgccggcgtggtg
atcggcgaccgcccgctggatgagctggtcccgctctatcaggacccgcgctccgacatg
ccggccacccagttcaacatgaaatgggtcgaggccgccggtctggtcaagttcgacttc
ctcggtctgaaaaccctgaccgtgatccagaacgccatcgcgctgatcctgaaatcgggc
cggccgctgcatgtggcgcaggatggccgcacgctttacgaaccgaaaccgggggccgag
aacgacatcggccatatcccgctggacgacaaggccacctacgacctttacgccgccgcc
cgcaccgtggccgtgttccaggtggaatccagcggcatgatggatgcgctgcgccggatg
aagcccacctgcatcgaggacatcgtggcgctggtggcgctgtatcgtcccggcccgatg
gagaacatcccggtctattgcgaggtcaagaacggcctgcgcgaaatcgaaccgctgcac
cccacgatcgaccatatcctcaaggaaacgcagggcatcatcgtctatcaggaacaggtg
atgcagatcgctcaggtcatggccggctacagcctgggcggcgccgacctgctgcgccgc
gccatgggcaagaagatcgccgaggaaatggccaaggaacggcccaagttcattgagggc
tgcacgaaaacccacggcatcgaccccaagaaatcgggcgaggtgttcgaccttctggaa
aagttcgccaactacggtttcaacaagtcgcacgccgccgcctatgccgtggtcagctac
caaaccggctggctcaaggcgaaccacccggtcgaattcatggccggggtgatgaattgc
gatattcacctcaccgacaagctggccgtctacaagcgcgaactcgacaagctggggatc
gaggtggttccgccctgcgtcaaccgcagccttgccactttcgacacggggcagggccgg
gtgatctatgcccttggcgcgctcaagaacgtcggcgtcgacgcgatgcgcctcatcgtc
gaggcgcgcaggaccgaagccggcgacaagcccttcgccacgctgttcgactttgcccgc
cgctgcgatctgaaacgcatcggcaagcggccgctggaaatgctggcccgcgccggggcc
ttcgaccagcttgatccgaaccgcgcccgcgtgttcgaggcgcttgatccgctggtcgcc
ttttccgccgccatccatgaggcgcaggcgtcgaaccaggtcagcctgttcggcgattcc
gggtccgacatccccgaaccgcgcctgccctggcgcgatgactggctgccggtcgaacgg
ctgtcgaacgaacaccttgccatcggcttctatctgtcgggccatccgctggatgactac
atgtccgccctgaagcgcaaggatgtgaaaacccttgcggaactgacgcaaaccgtcatg
gcgcgcggggcgcccatggtggccaagctggccggatcggtggccgcgcggcaggaacgc
aaatccgccaagggcaaccgcttcgccttcgtctcgctctccgatccgaccgggctttac
gaggtgacggtgttctcggacgtgctggaagtggcgcgcgatctgctggaaccggggcgg
aacgtcgttctgaccgtccgcgccgaccccgatggcgaaggggtgaagctgctggccaat
tccgtcgcgcccatcgacgcggtggccgatcaggccggtgcccgtccgatccgcatccac
ctcaaccggcccgaggcggtgacatcggtcgccaatctgctgggccaggtcgagggcaag
acccgagcccagatcaccctttgcgtcgcagatgcgcaggggcgcgagatcgacctgacg
ctgccgcaggcctatccggttaccccgcagatccgcggggcgatcaaggccatgcagggc
gtggttctggtggaagagatctga
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