KEGG   Pseudogemmobacter blasticus: B6K69_12250
Entry
B6K69_12250       CDS       T05669                                 
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
rbl  Pseudogemmobacter blasticus
Brite
KEGG Orthology (KO) [BR:rbl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rbl02048]
    B6K69_12250
Prokaryotic defense system [BR:rbl02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    B6K69_12250
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: AWD22348
LinkDB
Position
2514701..2516485
AA seq 594 aa
MSLLSALAAAYDRLPHAPPYGYSSEKIGFCVILNPDGTVAEVADLRGTDKKRSPRIMQVP
AAPKRSGSTPRPNFTWDNINYALGAGLLGDPNDCRFDAFKAKHLEYLRDLQLPDARAFCR
FLETWDPCCVADYFDMAKPPTEGVVFALAGNPAKVFLHELPELHALWSSEGERWKAVEGK
SSADAICLLTGRRSPIARTHAAIKGVWGAQVAGAALVSFNSDAYESYGHEQGDNAPVSEA
ATFAYTTALNLFLSDKHHRLQIGDTSTVFWAEAEESAAAEAESLFAGFFDTAPTRDDLAA
TEATLAQKVGEKLGAIREGKPLVQILPDLAGARFHVLGLAPNAARLSVRFYWDSTFGQLV
ANYQRFLADMALEPPPRDGWPPLWRYLVELAVQGKRENVPPLIAGEWMRAILTGSRYPMT
LLSTTLMRVRSDGEVNAYRAAILKSVLKRNLSMEAPVALDPANQNKGYILGRLFAVYEEV
QRAALGGHVNATIKDKFYGAASATPQKVFRTLDAGSQNHFSKLRKLSAGRAVNLEKLLTS
ITDLMEPGNDPIPSSLSAAEQALFGIGYYHQRSDFFRKRDEADPEGSPVTDASA
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgagcctgctttcggcccttgccgccgcctatgaccgcctgccgcacgcgccgccctac
ggctattcttcagagaagatcggtttctgcgtgatcctgaacccggatggcacggttgcc
gaggttgccgacctgcgcggaacggacaagaagcgcagtccgcggatcatgcaggtgccg
gcggcgcccaaacggtctggaagcacgccaaggccgaatttcacctgggataacataaat
tacgcgctaggcgcgggcttgctgggtgatccgaacgattgcaggttcgatgccttcaaa
gccaagcatctggaatacttgcgtgaccttcaacttcctgacgcgcgggctttctgccgc
tttctggaaacctgggatccgtgctgcgttgcagattacttcgacatggcaaagccgccg
acggaaggcgtcgttttcgccctcgctggcaatcctgcgaaggtatttctgcatgaactt
cccgaactccacgccctttggtcctcagaaggggaacgttggaaggctgttgaaggtaaa
agctctgcggatgccatctgcctgctgacaggcagacgatccccgattgcccgaacacat
gcggcgatcaagggcgtgtggggcgctcaggttgctggggcggccctggtttcattcaac
tcggatgcttatgaatcttacggccacgaacagggcgacaatgccccggtgtccgaggcg
gcgaccttcgcctatacgaccgcgctgaacctgttcctgtcggacaagcaccatcgcctg
cagatcggcgacacctcgacggtgttctgggccgaggccgaggagagcgcggccgccgag
gccgaaagcctgttcgccggttttttcgataccgcgccaacccgggacgatcttgccgca
accgaggcgaccctggcgcagaaggttggcgaaaagctgggcgcgatccgcgagggcaag
ccgctggtgcagatcctgcccgatcttgcgggcgcgcggttccatgttctgggccttgcg
cccaatgccgcgcgcttgtcggtgcggttctactgggacagcacctttggccagcttgtg
gcgaattatcagcgctttctggccgacatggcgctggagccgccgccccgcgacggctgg
ccgccgctttggcggtatctggtggaactggccgtgcagggcaagcgcgagaacgtgccc
cccctgatcgccggggaatggatgcgcgccatccttaccggcagccgctatccgatgacg
ctgctgtccaccaccctgatgcgggtccgctccgacggcgaggtgaatgcctatcgcgcc
gccatcctgaaatctgtcctgaaacgcaacctttccatggaggcccccgtggcgcttgat
cctgccaatcagaacaagggctatatccttggccgcctgttcgccgtctatgaagaggtt
cagcgcgccgcgctgggcggccatgtgaacgccacgatcaaggacaagttctatggtgcg
gcctcggccacgccgcagaaggtgttccgcacactggatgcgggatcgcagaaccacttt
tccaagctgcgcaaactgtcggcgggacgggcggtgaaccttgaaaagctgctgacctcg
atcaccgatctgatggagccggggaacgacccgatcccgtcatcgctttcggcggcggaa
caggcgctgttcggcatcgggtattaccaccagcgcagcgatttcttccgcaagcgcgac
gaggccgaccccgagggttcccccgtgacggacgccagcgcctga

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