Pseudogemmobacter blasticus: B6K69_14900
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Entry
B6K69_14900 CDS
T05669
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rbl
Pseudogemmobacter blasticus
Pathway
rbl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B6K69_14900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbl03019
]
B6K69_14900
Enzymes [BR:
rbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B6K69_14900
Messenger RNA biogenesis [BR:
rbl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B6K69_14900
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
AAA_22
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-ProteinID:
AWD22806
LinkDB
All DBs
Position
complement(3055437..3056741)
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AA seq
434 aa
AA seq
DB search
MTTFEALGLSPKLLKALEKTALQTPTPIQAQAIPAIMQGKDLMGLAQTGTGKTAAFGLPL
LHRLLDIGHPPGPRNVRALILVPTRELATQIRENFEVFTKGTAIKIVMVVGGASLNKQSQ
ALVRGTDVLVATPGRLIDLLERGDVSLEKCGYLVLDEADHMLDMGFIHALRRIAKHIPVR
RQTLMFSATMPKDIDEIAATYLRDPVKVQVAPPGKPAEKVTQGVHYIPNGDKARLLETYL
KTHEGEQALVFCRTKHGSDKLNKLLASWGFRVGTVHGNRSQNQRDRTLAEFKAGELDVLV
ATDVAARGIDIPTVRHVYNYDMPNVPENYVHRIGRTARAGAEGASISFCAPAEMGELQAI
EKILKKPLPVIGGAPWSAEVVAANPRPQQRQGRPGPRPAAKAGAKPQAKPRPMGGGQAPK
RSGAKRPSRPLPRG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttcgaagccctgggcctttcgcccaaactcctgaaagcgctggaaaagacc
gcgctgcaaacgccgacgccgattcaggcgcaggccattcccgccatcatgcagggcaag
gatctgatgggtctggcgcagaccggcaccggcaagacggcggccttcggcctgccgctg
ctgcaccggctgctggacatcggccacccccccggcccccgcaacgtgcgcgcgctgatc
ctggtgcccacccgcgaactggccacgcaaatccgtgaaaactttgaagttttcaccaaa
ggcaccgccatcaagatcgtcatggtcgtcggcggcgcctcgctgaacaagcagtcccag
gcgctggtgcgcggcaccgatgtgctcgtcgccacccccggccgcctgatcgacctgctg
gaacgcggcgatgtcagcctggaaaaatgcggctatctggtcctggatgaggccgatcac
atgctggacatgggcttcatccacgccctgcgccgcatcgccaagcatattccggtgcgt
cgtcagacgcttatgttctcggccaccatgcccaaggacattgacgaaatcgccgccacc
tatctgcgcgacccggtcaaggtgcaggtcgcgccccccggcaagccggcggaaaaggtc
acgcagggcgtgcattacatccccaacggcgacaaggcccgcctgctggagacctatctg
aaaacgcatgaaggtgaacaggcgctggtgttctgccgcaccaagcacggttcagacaaa
cttaacaaattgctggcaagctggggcttccgcgtgggcaccgttcacggcaaccgcagc
cagaaccagcgcgaccggacactggcggaattcaaggcgggcgagctggacgttctggtc
gccaccgatgtggccgcacgcgggatcgacattcccaccgtccggcacgtctacaactat
gacatgccgaatgtcccggaaaactacgtccaccgcatcggccgcaccgcccgcgccggg
gccgaaggggccagcatcagcttctgcgcacctgccgagatgggcgaactgcaagccatt
gagaaaattctgaaaaaaccgcttccggtcattggtggcgcgccgtggtcggccgaagtg
gtggccgcgaacccgcgcccgcagcagcgtcagggccgccccggcccccgcccggccgcg
aaggccggcgccaagccgcaggccaaaccccggcccatgggcggcgggcaggcccccaag
cgcagcggggccaagcgtcctagccggcctcttcctcgaggttga
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