Pseudogemmobacter blasticus: B6K69_15590
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Entry
B6K69_15590 CDS
T05669
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rbl
Pseudogemmobacter blasticus
Pathway
rbl03420
Nucleotide excision repair
rbl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B6K69_15590
03430 Mismatch repair
B6K69_15590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbl03400
]
B6K69_15590
Enzymes [BR:
rbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B6K69_15590
DNA repair and recombination proteins [BR:
rbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B6K69_15590
MMR (mismatch excision repair)
Other MMR factors
B6K69_15590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWD22926
LinkDB
All DBs
Position
3189796..3192330
Genome browser
AA seq
844 aa
AA seq
DB search
MTPWEDNEAFEAAAVPLSQRALAQRPAPYLDDLNPAQREAVEALDGPVLMLAGAGTGKTK
ALTARIVHLLALGKARPHEILAVTFTNKAAREMKDRVLRMLGPAGEGMPWMGTFHSLSVK
ILRRHAELVGLKPSFTILDTDDQLRLIKQIMEPERLDMKRWPPRLVAAKIDQWKNQARPP
HRVPDSEDFVIDFERLVDEWDKSFSAPKFNKSDRGSVSAQSDKPVITAKEIYRRYQDRLL
TLNACDFGDLLLHCVEIFKTHPDVLAQYQRWFRYILVDEYQDTNVCQYLWLRLLAQAHRN
ICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAKVIRLEQNYRSTPHILAAASGVIAANAN
RLGKTLWTEAETGEKVRLIGHWDGEEEARWIGEEIEAIQRGTRGWAPVSLNGQAILVRAS
HQMRAFEDRFLTIGLPYRVIGGPRFYERQEIRDAMAYFRLAVSPDDDLAFERVVNVPKRG
LGDKAVQSIQREARADGLTLVDGARSLLAAGGIGGKGANQLRAFCDGIDRWHAAIRDARP
AVADAVIEPLLPDTPPNSDLGHVRLAEVILEESGYVSMWQNDKTPEAEGRLENLKELVKA
LEQFDSLQGFLEHVALIMDNDSEDATEKVSIMTLHAAKGLEFPVVFLPGWEDGLFPSQRS
MDESGLKGIEEERRLAYVGITRAEELCTISFASNRRVYGQWQSQLPSRFIDELPQAHVEV
LTPPGLMGGGYGAAAPGFGGGFGSTIEERATRSDVYNSPGWRRLQDRQGQRPVSQPREAR
HVTIDHQAESGYELGERVFHVKFGYGRVIGIEGDKLDIRFEKAGEKKIVARFVMPADMGD
EVPF
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgtgggaagacaatgaggccttcgaggccgccgccgtgcccctgtcgcagcgc
gccctggcgcagcggcccgccccttatctggatgatctgaaccccgcgcagcgcgaggcg
gtcgaggcgctggatgggccggtcctgatgctggccggcgcgggaaccggcaagaccaag
gcgctgacggcgcggatcgtgcacctgctggcgctgggcaaggcccggccccacgagatt
ctggcagtgaccttcaccaacaaggccgcgcgcgagatgaaggaccgggtgctgcggatg
ctgggtccggcgggggaggggatgccctggatgggcaccttccattcgctgtcggtcaag
atcctgcgccgccatgccgaactggtggggctgaagcccagcttcaccatcctcgatacg
gatgaccagctgcgtctcatcaaacaaattatggagccggagaggcttgacatgaagcga
tggccaccacggcttgtcgctgcaaaaattgatcagtggaagaaccaggcgcgtcctccg
catcgagtgcccgacagtgaagatttcgtgattgattttgagcgtcttgtcgatgaatgg
gacaagagtttttcggcgcctaaatttaacaagagtgatcgtggatcagtgtcagcccag
tctgacaaaccggttattacagcaaaggaaatttatagacgttatcaagaccggctccta
accttgaacgcctgcgatttcggcgatctgctgctgcattgcgtggaaatcttcaagacg
cacccggatgtgctggcgcagtaccagcgctggttccgctacattctggtggacgagtat
caggataccaacgtctgccaatacctgtggctgcggttgctggcgcaggcgcatcgcaac
atctgctgcgtgggcgatgacgaccagtcgatctatggctggcgcggggccgaggtgggc
aacatcctgcggttcgagaaggactttcccggcgccaaggtgatccggcttgagcagaac
tatcgctcgacaccgcatatcctggccgccgcatcgggggtgattgcggccaacgccaac
cgtctgggcaagacgctgtggaccgaggccgaaacaggcgagaaggtccgcctgatcggc
cattgggacggcgaggaagaggcgcgctggatcggggaggagatcgaggcgatccagcgt
ggcacacggggctgggcgccggtcagcctgaacgggcaggccatccttgtgcgggccagc
caccagatgcgggccttcgaagaccgtttcctgacgatcgggctgccctaccgggtgatc
ggaggcccgcgcttctatgagcggcaggaaatccgcgatgccatggcctatttccggctg
gcggtgtcccccgatgacgaccttgccttcgagcgggtggtgaacgtgccgaagcgcggc
cttggcgacaaggcggtgcagtcgatccagcgcgaggcgcgggcggacgggctgacgctg
gtggacggcgcgcggtccctgctggcggccggcggcattggcggcaagggcgcgaaccag
ttgcgcgccttttgcgacgggatcgaccgctggcacgcagcgatccgcgatgcgcggccg
gcggtggccgatgcggtgatcgaaccgctgctgcccgacacgccgccgaacagcgatctg
ggccatgtgcggctggccgaggtgatccttgaagagtccggctatgtctcgatgtggcag
aacgacaagacgcccgaggccgaggggcggctggagaacctgaaggaactggtcaaggcg
ctggagcagttcgacagtctgcagggctttctggaacatgtcgcgctgatcatggacaat
gacagcgaggatgcgaccgagaaggtcagcatcatgacgctgcacgcggccaaggggctg
gagtttccggtggtcttcctgccgggctgggaggacggcctgttccccagccagcgcagc
atggacgaaagcgggctgaagggaatcgaggaggaacgccggctggcctatgtcggcatc
acccgggccgaggagttgtgcacgatttccttcgcctcgaaccggcgggtctatgggcaa
tggcaaagccagttgcccagccggttcatcgacgagctgccgcaggcgcatgtcgaggtg
ctgacaccgccgggcctgatgggcggcggctatggcgcggcggcgccggggttcgggggc
gggttcgggtcaacgatcgaggaacgcgcgacgcggtccgatgtctacaacagccccggc
tggcggcgcttgcaggaccggcaggggcaacgccctgtcagccagccgcgcgaggcgcgg
catgtcaccatcgaccatcaggccgagagcggctacgagctgggcgagcgggtgttccat
gtgaagttcggctatggccgcgtgatcgggatcgagggcgacaagctggacatccgcttt
gaaaaggcgggcgagaagaagatcgtcgcgcgtttcgtcatgccggccgacatgggcgac
gaggtgccgttctga
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