Rhizobiales bacterium NRL2: TEF_02625
Help
Entry
TEF_02625 CDS
T04419
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TEF_02625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbm03019
]
TEF_02625
Enzymes [BR:
rbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TEF_02625
Messenger RNA biogenesis [BR:
rbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TEF_02625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Utp25_C
Flavi_DEAD
HEM4
B12-binding
Cas3-like_C_2
DUF8086
DUF3834
CMS1
Motif
Other DBs
NCBI-ProteinID:
ANK79804
LinkDB
All DBs
Position
568595..569917
Genome browser
AA seq
440 aa
AA seq
DB search
MTQFNELGLAESVLRAVEAEGYTIPTPIQAEVIPAMLAGRDVLGTAQTGTGKTAAYVLPL
LSRIADERRAPRPKTCTTLILAPTRELANQIVEAIRTYGRKIRPSVALVVGGVRPGPQIR
QMAGGVDILVATPGRLEDHMSTGVIRLDGVANIILDEADQMMDMGFMPAIRRILQKVPAD
PQTILLSATMPRQIRALAQDFLNDPAEIAVAQADRPAERIAQEVVYVDARDKRQRLVELI
EDREVGRAIVFARTKHGAEKLSTYLEKAGIASTAIHGNKNQSQREKALSRFRDGKVAVLV
ATDVAARGIDVDGITHVINFELPNVPEAYVHRIGRTARAGASGIAISFCDGEERGLLRDI
ERVIGGTFNDAGELTDTPPAPRRERSGPGKTRKPGGQRGANHRKGGPRPPRGGHDGGDRR
ESRGGEGRRPARPRRQKISA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
ttgacccagttcaatgaactcggcctcgccgagtccgtccttcgcgctgtggaagccgaa
ggctacacgattcccaccccgatccaggccgaagtgattccggccatgctggctggccgc
gacgtgctcgggaccgcccagaccggcaccggcaagaccgccgcctatgtgctgccgctg
ctctcccgcatcgcggacgaacgccgcgcgcccaggccgaagacctgcacgacgctgatc
ctggcgccgacgcgtgagctggccaaccagatcgtcgaggcgatccgcacctatggccgc
aagatccgtccttcggtggccctggtcgtcggcggtgtccgccccggcccgcagatccgg
cagatggccggcggcgtcgacatcctggtcgcgacccccggccggctggaggaccacatg
tccaccggcgtcatccgtctcgacggcgtcgccaatatcatcctcgacgaggccgaccag
atgatggacatgggcttcatgcccgccatccgccgcatcctgcagaaggtgccggccgat
ccgcagaccatcctgctctcggccaccatgcccaggcagatccgcgccctggcgcaggat
ttcctgaacgacccggcggagatcgccgtggcccaggccgaccggccggcggagcgcatc
gcccaggaagtcgtctatgtcgacgcccgcgacaagcgtcagcgtctggtggagctgatc
gaggaccgcgaggtcggccgcgcgatcgtcttcgcgcgcaccaagcacggcgccgagaag
ctgtcgacctacctcgagaaggccggcatcgcctcgacggcgatccacggcaacaagaac
cagtcccagcgggagaaggcgctttcgcgcttccgtgacggcaaggtcgcggtgctggtg
gcgaccgacgtcgccgcgcgcggcatcgatgtcgacggcatcacccacgtcatcaacttc
gagctgcccaacgtgccggaggcctatgtccaccgtatcggccgcacggcgcgcgccggt
gcgagcggcatcgccatctccttctgcgacggcgaggagcgcggtctgctgagggacatc
gagcgggtcatcggcggcaccttcaacgatgccggcgaactgaccgacacgccgcccgcg
ccgcgccgcgagcgctccggcccgggcaagacccgcaagcccggcggccagcgcggcgcc
aatcaccgcaagggcgggccgcgcccgccgcgcgggggccatgacggcggcgaccgccgc
gagtcgcgcggcggcgaaggccgccggccggcccggccccggcgtcagaagatcagcgcg
tag
DBGET
integrated database retrieval system
