Rhizobiales bacterium NRL2: TEF_04400
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Entry
TEF_04400 CDS
T04419
Name
(GenBank) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm00061
Fatty acid biosynthesis
rbm00071
Fatty acid degradation
rbm01100
Metabolic pathways
rbm01212
Fatty acid metabolism
rbm02024
Quorum sensing
rbm04146
Peroxisome
Module
rbm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TEF_04400
00071 Fatty acid degradation
TEF_04400
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TEF_04400
09145 Cellular community - prokaryotes
02024 Quorum sensing
TEF_04400
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rbm01004
]
TEF_04400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbm04147
]
TEF_04400
Enzymes [BR:
rbm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TEF_04400
Lipid biosynthesis proteins [BR:
rbm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TEF_04400
Exosome [BR:
rbm04147
]
Exosomal proteins
Exosomal proteins of breast milk
TEF_04400
Exosomal proteins of breast cancer cells
TEF_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ANK80112
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All DBs
Position
944858..946444
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AA seq
528 aa
AA seq
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MNLTDWDNRERRYDLSPEAAARELERHYGIAGETTFADLVARAAEQFPAKVAIVHHGRIL
TYAQLMRKVAAVRRFVADRAKPGQRVALLVDNSDHYPIWYFGILAAGAVAVPINPKLVAR
ELGYMVGDAEPVLFVEETRFEKLIDDALAMAGRDVPRFVVDRDPPPPYAGEWQPTRGIDV
HSPAAIYYTSGTTGAPKGVIHTHYSLMAGAVLCPEAWEHTGPETRFLACTPMFHIASHVF
FLVILALGATLVVDSYQTERTMRQIADHGIDAFFAVPSQLLMMEQHPLKDELDFSHVKMV
CFGAAPMAMDRLQAVQDMFPNAGLVHAMGQTESCGMIVTLSSKRAFEKIGSVGVPVPGNV
IRVVDADDNDVPRGEIGELVSRGPQNMIGYLNRPDATAETLRGGWLHTGDLGYQDADGYL
YLVDRSKDMIIRGGENIYSTEVEDVVYMLDAVSLCAVIGVPDKLFGEEVGVFIQTRKGRA
LAAEDVQKHCREHLAAYKVPRVVEFVDDFAMTATGKIQKGELRKRYQG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctgaccgattgggacaaccgggagcgccgctacgacctgagcccggaggcggcg
gcgcgggagcttgagcgccattacggtatcgccggcgagaccaccttcgccgacctggtg
gcccgggccgccgaacagtttccggccaaggtcgcgatcgtccatcatggccgcattctg
acctatgcccagctcatgcggaaggtggcggccgtgcgccgtttcgtggcggaccgcgcg
aagccgggccagcgggtcgcgctgctggtcgacaactccgaccactatccgatctggtat
ttcggcatcctggcggccggggccgtcgcggtgccgatcaaccccaagcttgtggcccgc
gaactgggctacatggtcggcgacgcggaacccgtgctgttcgtcgaggagacccgcttc
gagaagctgatcgacgacgccctggcgatggcgggacgcgacgtgccgcgcttcgtggtc
gaccgcgacccgccgccgccctatgccggcgagtggcagccgacgcggggcatcgacgtc
cacagcccggcggcgatctactacacttccgggaccacgggcgcgcccaagggcgtgatc
cacacccattacagcctgatggccggcgccgtcctttgtccggaagcctgggagcacacc
gggccggagacgcgctttctggcctgcacgccgatgttccatatcgccagccacgtcttc
ttcctggtgatcctggcgctgggcgcgacgctggtggtcgacagctatcagaccgagcgc
accatgcgccagatcgcggatcacggcatcgacgccttcttcgcggtgccctcgcagctt
ctgatgatggagcagcacccgctgaaggacgaactcgatttctcccacgtgaagatggtc
tgtttcggcgccgcgccgatggccatggaccggctacaggcggtccaggacatgttcccc
aatgccggcctggttcacgccatgggacagaccgaaagctgcggcatgatcgtcaccctg
tcgtcgaaacgggccttcgagaagatcggctcggtcggcgtgcccgtgccgggtaacgtc
atccgcgtggtcgacgcggacgacaacgacgtgccccggggcgagatcggtgaactggtc
agccgcggcccgcagaacatgatcggctatctcaaccgcccggacgcgacggcggagacc
ctacgcggcggctggctgcacaccggcgatctcggctatcaggacgcggacggctatctc
tacctggtcgaccgttccaaggacatgatcatccgcggcggcgagaacatctactccacc
gaggtcgaggatgtcgtctacatgctggacgcggtctcgctctgcgcggtgatcggcgtg
cccgacaagctgttcggcgaggaagtcggcgtgttcatccagacccggaagggcagggcg
ctcgcggccgaggacgtgcagaagcactgccgcgaacatctggccgcctacaaggtgccc
cgcgtcgtggagttcgtcgacgacttcgctatgaccgcgaccggcaagatccagaagggc
gaactccgcaagcgctaccagggctga
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