KEGG   Rhizobiales bacterium NRL2: TEF_05345
Entry
TEF_05345         CDS       T04419                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rbm  Rhizobiales bacterium NRL2
Pathway
rbm03030  DNA replication
rbm03430  Mismatch repair
rbm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rbm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TEF_05345
   03430 Mismatch repair
    TEF_05345
   03440 Homologous recombination
    TEF_05345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rbm03032]
    TEF_05345
   03400 DNA repair and recombination proteins [BR:rbm03400]
    TEF_05345
Enzymes [BR:rbm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TEF_05345
DNA replication proteins [BR:rbm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TEF_05345
DNA repair and recombination proteins [BR:rbm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TEF_05345
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like Rv2175c_wHTH
Other DBs
NCBI-ProteinID: ANK80281
LinkDB
Position
complement(1162979..1163383)
AA seq 134 aa
MHKTFQTLVDPGVDLPRKITQITGITTEQIRAEGSPSEQVFRDLRQFIGDLPLIAYNAAF
DAKFLSAEWSRIGIRATNEYHDILEMARTTVSLRSYKLANVAKHLGVDVTADHRALSDAH
AALLVYDKLMRLRG
NT seq 405 nt   +upstreamnt  +downstreamnt
gtgcataagacgtttcagacgctcgtcgatccgggcgtcgatcttcctcggaaaatcact
cagattaccggcatcacaaccgagcagatcagagcggaaggatcgccatccgaacaggtc
ttccgagaccttcgtcaatttatcggtgatttgcccttgatcgcctacaacgccgccttc
gatgcaaaattcctatcggcggagtggtcgcggatcgggatcagagccacaaacgaatat
cacgatattctggagatggcgcgaacgacggtctcgcttagatcgtacaagctcgccaac
gtcgccaaacacctaggcgttgacgtcactgctgaccatagagcgctcagcgatgcccat
gcagccttgcttgtctacgacaaactgatgcggctaagaggatga

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