Rhizobiales bacterium NRL2: TEF_07740
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Entry
TEF_07740 CDS
T04419
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm00260
Glycine, serine and threonine metabolism
rbm00460
Cyanoamino acid metabolism
rbm00630
Glyoxylate and dicarboxylate metabolism
rbm00670
One carbon pool by folate
rbm00680
Methane metabolism
rbm01100
Metabolic pathways
rbm01110
Biosynthesis of secondary metabolites
rbm01120
Microbial metabolism in diverse environments
rbm01200
Carbon metabolism
rbm01230
Biosynthesis of amino acids
rbm01240
Biosynthesis of cofactors
rbm04981
Folate transport and metabolism
Module
rbm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TEF_07740 (glyA)
09102 Energy metabolism
00680 Methane metabolism
TEF_07740 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TEF_07740 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
TEF_07740 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TEF_07740 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
TEF_07740 (glyA)
Enzymes [BR:
rbm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
TEF_07740 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ANK80702
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All DBs
Position
1671720..1673024
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AA seq
434 aa
AA seq
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MSMAEATDAVRDFWSADLERDDPELFESFRLEMDRQQNQIELIASENIASPAVIKAMATV
FQNKYAEGYPGRRYYGGCEFVDIAERLAIERACKLFDCSFANVQPHSGAQANQAVFMALL
QPGDTVMGMSLDAGGHLTHGAAPNQSGKWFKAVQYGVRREDALIDFDQVEKLAKEYRPKL
IIAGGSAYPRIIDFKRFREIADEVGAWLMVDMAHFAGLVAGGVHPNPLDHAQIVTSTTHK
TLRCARGGLILSRDEALGKKINSAVFPGLQGGPLMHAIAAKAAGFGEALKPEFHAYSRQV
VANAKALAGALMERGFDIVSGGTDTHLMLVDLRSKGVTGRDAERTMENAYMTCNKNGVPF
DPEKPMVTSGVRLGTPAGTTRGFGEAEFQKVGHLIADVLEAYAQSNGDNGAAEAKAREEV
KQLCGRFPIYTQGL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggctgaagcaaccgacgcggtgcgtgatttctggtcggcggacctggagcgc
gacgatcccgaactgttcgagtccttccggctggagatggaccgtcagcagaaccagatc
gaactcatcgcctccgagaacattgccagccccgcggtcatcaaggcgatggcgacggtg
ttccagaacaagtacgccgaaggctatccgggccggcgttactatggcggttgcgagttc
gtggacatcgccgagcggctggcgatcgagcgggcctgcaagctgttcgactgcagcttc
gccaacgttcagccccattcgggcgctcaggccaaccaggccgtcttcatggcgctgctg
cagccgggcgacacggtcatgggcatgtcgctggacgccggcgggcacctgactcacggc
gccgcaccgaaccagtccggcaagtggttcaaggccgttcagtacggcgtccggcgcgag
gatgccctgatcgacttcgatcaggtggagaagctggcgaaggaatacaggccgaagctg
atcatcgccggcggatcggcctatccgcgcatcatcgacttcaagcgtttcagggagatc
gccgacgaggtcggcgcctggctgatggtcgacatggcgcatttcgccggtctggtcgcc
ggcggggtgcacccgaacccgctggaccatgcgcagatcgtcacttcgacgacccacaag
accctgcgctgcgcccgcggcgggctgatcctcagccgcgacgaggcgctgggcaagaag
atcaactcggccgttttccccggacttcagggcgggccgctgatgcacgccatcgctgcc
aaggcggccggcttcggcgaggcgctgaagcccgagttccacgcctacagccgccaggtc
gtggccaatgcgaaggcgcttgccggggcgctgatggagcggggcttcgacatcgtctcg
ggcggtaccgacacgcacctgatgctggtcgatctgcgctccaagggcgtcaccggccgt
gacgccgaacggacgatggaaaacgcctacatgacctgcaacaagaatggcgtgccattc
gacccggagaagcccatggttacgtctggcgtccggctcggcacgccggcgggaacgacc
cgcggcttcggcgaagcggagttccagaaggtcgggcatctgatcgccgacgtgctggag
gcctacgcccagtccaatggcgacaacggggccgcggaggcgaaggcgcgcgaagaggtc
aagcagctctgcggccggttcccgatctatacgcaaggcctttga
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