Rhizobiales bacterium NRL2: TEF_09180
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Entry
TEF_09180 CDS
T04419
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm02020
Two-component system
rbm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TEF_09180
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TEF_09180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rbm02022
]
TEF_09180
02035 Bacterial motility proteins [BR:
rbm02035
]
TEF_09180
Two-component system [BR:
rbm02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
TEF_09180
Bacterial motility proteins [BR:
rbm02035
]
Flagellar system
Flagellar assembly proteins
Others
TEF_09180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA_19
AAA_3
Response_reg
AAA
nSTAND3
ATPase
AAA_22
AAA_30
AAA_PrkA
HTH_Tnp_ISL3
HTH_30
HTH_28
MCM
AAA_7
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
ANK80946
LinkDB
All DBs
Position
complement(1987864..1989255)
Genome browser
AA seq
463 aa
AA seq
DB search
MRLLIVGPLSGQFGAASKIAMQNGAKVAHVDTVESAMHALRSGRGADLAMVDVKLDIAAF
VTGLAAEHISLDVIGCGIGNDTEAAVRAIKGGAKEYVPLPPDPELIAAVLKAVADEETDL
LYRDQRMEQVIKLADQVAPSNACILVTGESGTGKEVMARHIHLKSRRADKPFVAVNCAAI
PDNLLESELFGHEKGAFTGAVARRIGKFEEADGGTLLLDEISEMDIRLQAKLLRAIQERE
IDRVGGGKPIKVDIRVIATSNRDLVAEVKSGTFREDLLYRLNVVNLKLPPLRERPEDIAV
LADHFVAKYSEANGVACKPIDRDAARVLRGHPWPGNVRELENTLHRAVLLATGNEITIEA
IVLPDGSRPGENAAPSAGRVAGEISGGGVISEEDAAQAGLVGRTVAEVEQQLILETLDHC
FGNRTHAANILGISIRTLRNKLKAYTEEGVPVPGPGEMRRMAY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttcttatcgtagggcccctgtccggccagttcggcgcggccagcaagatcgcc
atgcagaacggggccaaggtcgcccatgtcgacaccgtcgagagcgcgatgcacgcactg
cgttccggccgcggcgccgacctcgccatggtcgacgtcaagctcgacatcgccgccttc
gtgacggggctggccgccgagcacatcagtctggacgtcatcggctgcggcatcggcaac
gacaccgaagccgcggtgcgcgccatcaagggcggcgccaaggaatatgtccccctgccc
ccggatcccgagctgatcgccgccgtcctgaaggcggtcgccgacgaggagaccgacctg
ctctaccgcgaccagcgcatggagcaggtgatcaagctggccgaccaggtggcgccttcc
aacgcctgcatcctggtcaccggcgagagcggcaccggcaaggaggtcatggcgcgccac
attcacctgaagagccggcgcgccgacaaacccttcgtcgccgtcaactgcgccgccatc
cccgacaaccttctggaatcggagctgttcggtcacgagaagggcgccttcaccggcgcg
gtggcccggcgcatcggcaagttcgaggaagccgatggcggaacgctgctgctggacgaa
atctccgaaatggacatccgcctgcaggccaagctgctgcgggcgatccaggaacgcgag
atcgaccgggtcggcggcggcaagccgataaaggtcgatatccgggtcatcgccacctcc
aaccgcgatctcgtcgccgaggtgaaatcgggcaccttccgcgaggacctgctttaccgc
ctgaacgtggtgaacctgaagctgccgccgctgcgcgagcggcctgaggacatcgcggtt
ctggccgaccattttgtcgccaagtattccgaggccaacggcgtcgcctgcaaaccgatc
gaccgcgacgccgcgcgtgtcctgcgcgggcatccgtggccgggcaatgtccgcgaactg
gaaaacaccctccaccgcgccgtgctgctggcgaccgggaacgagatcaccatcgaagcg
atcgtgctgcccgacggttcccgtccgggggagaacgcggcgccgtccgcggggcgggtc
gccggagagatctccggcggcggcgtgatctcggaggaagacgcggcgcaggccggcctg
gtcggccgcaccgtcgccgaggtcgagcagcagctcatcctggagaccctggaccactgc
ttcggcaaccgcacccacgcggccaacatcctgggcatctcgatccggacgcttcgcaac
aagctgaaggcctataccgaggagggcgtccccgtccccgggccgggcgagatgcggcgc
atggcgtactga
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