Rhizobiales bacterium NRL2: TEF_11960
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Entry
TEF_11960 CDS
T04419
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm02010
ABC transporters
rbm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TEF_11960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TEF_11960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbm02000
]
TEF_11960
Transporters [BR:
rbm02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
TEF_11960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
ANK81435
LinkDB
All DBs
Position
complement(2556393..2557622)
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AA seq
409 aa
AA seq
DB search
MTAAGVLAAAVASFTAANAAEIVIGQMTDRTGITANVGNPVGDAVQDYVRLVNKKGGVNG
HTIRVVEIDNQYKVPIAIEGYQRIKSEGAVLVGLFGTPVTQALTADLEKDQIPGTSPGFG
TAASADGENYPYLFPAAASYWSQAGGAVEFARQRLGGDLKGKKIAYLFFDNPAGREGLPV
IRKLAEVEGYELQEFPVPSPGIEMDNQARDIARRFRADFVISHLFGRAPSVQLQALRRAG
FPLEKVVSFVWGQSEADIEAGGGYAENVGYNGIQFAGVGDDFEVRREIEAMYKEEGQDLP
DTFDSTVFYNRGLLIGALHVQAVRNAVEANGGSADITGTDVRDGFRAIKEFKLGELVPPL
NLAGGDHEGGGWVRVFTVTKDGFEPATDWFKGYRDVVFEMIKEEAAKQN
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
ttgacggccgcgggcgtactcgccgccgccgttgcgtccttcaccgcagcgaatgcggcc
gagatcgtcatcggtcagatgacggaccgtaccggtatcaccgcgaatgtcggcaatccc
gtcggcgacgccgtccaggactacgtccgcctggtgaacaagaaaggcggcgtcaacggt
cacacgatccgcgtcgtcgaaatcgacaaccagtacaaggtgccgatcgcgatcgaaggc
tatcagcgcatcaagtccgagggcgcggttctggtcgggctgttcggcacgccggtgacc
caggcgctgacagcggacctggagaaggaccagatccctggcacttcgcccggtttcggc
accgccgcttcggccgacggcgagaactacccctatctgttccccgccgcggccagctac
tggtcgcaggccggcggcgcggtcgaattcgcgcgccagcgcctcggcggcgacctgaag
ggcaagaagatcgcctatctgttcttcgacaatccggccggccgcgaaggactgcccgtc
atccgcaaactggccgaggtcgaaggctatgaactccaggagttcccggtcccctcgccc
ggcatcgagatggacaaccaggcgcgtgacatcgcccgccggttccgggccgacttcgtg
atcagccacctgttcggccgcgccccgtcggtgcagctccaggcgctgcgccgtgccggc
ttcccgctggagaaggtggtgtccttcgtctggggtcagtcggaagccgacatcgaggcc
ggtggcggctacgccgagaacgtcggctacaacggcatccagttcgccggcgtgggcgac
gacttcgaggtccgccgcgagatcgaagccatgtacaaggaagaaggccaggatctgccg
gacaccttcgactcgacggtgttctataaccggggcctgctcatcggcgcgctgcacgtt
caggcggtccgcaatgcggtcgaggccaatggtggcagcgccgacatcaccggcaccgac
gtccgcgacggcttccgggcgatcaaggagttcaagctgggcgaactcgtcccgccgctg
aacctcgccggcggcgaccacgagggcggcggctgggtccgcgtcttcacggtcaccaag
gacggcttcgagccggccaccgactggttcaagggctatcgcgacgtcgtcttcgagatg
atcaaggaagaggccgcgaaacagaactga
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