Rhizobiales bacterium NRL2: TEF_11975
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Entry
TEF_11975 CDS
T04419
Name
(GenBank) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm00061
Fatty acid biosynthesis
rbm00071
Fatty acid degradation
rbm01100
Metabolic pathways
rbm01212
Fatty acid metabolism
rbm02024
Quorum sensing
rbm04146
Peroxisome
Module
rbm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TEF_11975
00071 Fatty acid degradation
TEF_11975
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TEF_11975
09145 Cellular community - prokaryotes
02024 Quorum sensing
TEF_11975
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rbm01004
]
TEF_11975
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbm04147
]
TEF_11975
Enzymes [BR:
rbm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TEF_11975
Lipid biosynthesis proteins [BR:
rbm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TEF_11975
Exosome [BR:
rbm04147
]
Exosomal proteins
Exosomal proteins of breast milk
TEF_11975
Exosomal proteins of breast cancer cells
TEF_11975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
HeLo
Motif
Other DBs
NCBI-ProteinID:
ANK81438
LinkDB
All DBs
Position
complement(2559734..2561617)
Genome browser
AA seq
627 aa
AA seq
DB search
MTDTLASLLLNNEKLRPTKPAMREKSLGIWQTYTWKDYVDNVRRFALGLKARGFGPGDKL
CVAGDNRPRLYWAEMAAVCLGGTAVPVYSDAIATELMFVLNDADVKVIVAEDQEQVDKIL
SLRENLPGLELLVFDDPLGMSKYDDPILKDFDSIQIEGDKLDDAGFYEAAAAVKAEDIAF
MCYTSGTTGNPKGVMLSHHNLVSASRIFLENETVRESDDFLSYLPMAWVGEALYNTAVSI
TAGCASNCPESGETFRRDGRELGATGLVAAPRTFEQILSEIQVKANDAPPLKRWVFNTFR
DAAVEIENLKAEGRPAPFGKKLMKWLGEILVYGPIRDQYGFRRARWCYVGGAPLGPDTFR
FFRAMGINLKQLYGSTEACGTVTLQRDGEASPDNVGKPCPGIEVKIAENGEVLVRSPGIF
VGYYKNEKATRETIDEDGWFHTGDAGILESTGELIIIDRAKDVGKLVDGSPFAPQYVENK
LKFSPYISEAVSFGHDKPYVCAMIAIDYNTVGNWAEKEGIAYSNYMDLSQKQKVRDLVHD
EIVRINQSLPEVSRIKRFLLLAKDLDADDAEVTRTRKLRRGYIAEKYEPVIEAFYGGEKE
VDITTEVTFEDGRKATMDAHLTIQDAA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccctcgcgagcctgttgctgaacaacgagaagcttcggccgaccaaaccc
gcgatgcgcgagaagagcctcggcatctggcagacctacacctggaaggattacgtcgac
aatgtccggcgcttcgcgctgggcctcaaggcgcggggcttcggccccggcgacaagctc
tgcgtggccggcgacaaccggccccgcctctactgggccgagatggccgccgtctgcctc
ggcggcaccgcggttcccgtctactccgacgccatcgccacggaactgatgttcgtcctc
aacgacgcggacgtgaaggtcatcgtggccgaggaccaggagcaggtcgacaagatcctg
tcgctgcgcgagaacctgccggggctggagcttctggtgttcgacgacccgctcggcatg
tcgaagtacgacgacccgatcctgaaggacttcgactccattcagatcgagggcgacaag
ctcgatgacgccgggttctatgaggccgccgcagcggtgaaggcggaggatatcgccttc
atgtgctacacctccggcaccaccggaaacccgaagggcgtgatgctttcgcaccacaat
ctggtgtccgcctcccggatcttcctggaaaacgagacggtcagggaatccgatgacttc
ctgtcctatctgccgatggcctgggtcggcgaggcgctctacaacaccgccgtcagcatc
accgccggctgcgcctccaactgtccggaatcgggcgagaccttccgccgcgacggccgc
gagctgggggcgaccggccttgtcgccgcgccccgcacgttcgagcagatcctgtcggaa
atccaggtcaaggccaatgacgcgccgccgctgaagcgctgggtcttcaataccttccgc
gacgccgccgtcgagatcgagaacctcaaggccgaagggcgcccggcgccgttcgggaag
aagctgatgaagtggctgggcgagatcctggtctacggtccgatccgcgaccagtacggc
ttccgccgggcgcgctggtgctatgttggcggcgcgccgctcgggcccgacacgttccgt
ttcttccgcgcgatggggatcaacctgaagcagctctacggctcgacggaagcctgcggc
acggtcacgctgcagcgcgacggtgaagcgtcgccggacaatgtcggcaaaccctgtccc
ggcatcgaagtgaagatcgcggagaatggcgaggtgctggtcagaagtccgggcatcttc
gtcggctactacaagaacgagaaggccacccgcgagacgatcgacgaggacggctggttc
cacaccggcgatgccggcattctcgagagcacgggcgaacttatcatcatcgaccgcgcc
aaggacgtgggcaagctggtcgacggctcgcccttcgcgccgcagtacgtcgagaacaag
ctgaagttcagcccctacatttccgaggcggtctccttcggccacgacaagccctatgtc
tgcgcgatgatcgccatcgactacaacacggtgggcaactgggccgagaaggaaggcatc
gcctactccaactacatggatctgtcgcagaagcagaaggtccgcgacctggtccatgac
gagatcgtccgcatcaaccagagtttgccggaagtcagccgcatcaagcgcttcctgctg
ctcgccaaggacctcgacgcggacgacgccgaggtcacacgcacgcgcaagctccggcgc
ggctatatcgcggaaaagtacgaaccagtgatcgaggccttctacgggggagagaaggag
gtcgacatcacgactgaggtcacgttcgaggacggtcggaaagcgacgatggacgcgcat
ctgaccatccaggacgcggcctag
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