Rhizobiales bacterium NRL2: TEF_12195
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Entry
TEF_12195 CDS
T04419
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm03030
DNA replication
rbm03430
Mismatch repair
rbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TEF_12195
03430 Mismatch repair
TEF_12195
03440 Homologous recombination
TEF_12195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbm03032
]
TEF_12195
03400 DNA repair and recombination proteins [BR:
rbm03400
]
TEF_12195
Enzymes [BR:
rbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TEF_12195
DNA replication proteins [BR:
rbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TEF_12195
DNA repair and recombination proteins [BR:
rbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TEF_12195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Mg_chelatase
NACHT
AAA_22
AAA_16
AAA_33
RuvB_N
nSTAND3
AAA_24
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ANK81475
LinkDB
All DBs
Position
2614254..2615375
Genome browser
AA seq
373 aa
AA seq
DB search
MSDEPERPAPDEVDADLHPALTPFLMGHQSAERAMAAAIADGGQLHHAWLLAGPAGIGKA
TLAYRFARRLLAGNGDGGRLGDDGRGLHTDPENPVFSAVASGGHPNLVRLRRTWDFEKKR
WFTGIRIDEVRQLTRFLGQSAARAGRRVVIVDAADDMTRSAENALLKPLEEPPANTVFLL
VAHRPGALLPTIRSRCRRLDLRAPDSREALEVLRRLRPDIDESEREMLLALADRSPGRAL
RLAEAGGAEIYRQLLEVLAGAPAIEKGAALRLAALTDKGAEAERRFAILGDLMDGVLRRI
VLAGGGAADIAHPSEQEAELARRARGGSLEHWFELCENLRHLRERTEAVNLNRKTVTLTL
FSAFEDAARRAGL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaacccgaacgcccggcgcccgacgaggtcgacgccgaccttcatccggcg
ctgacgcctttcctgatggggcaccagtcggccgagcgcgccatggccgctgccatcgcc
gacggcggacaactccaccacgcctggctgctggccgggccggcaggcatcggcaaggcg
acccttgcctatcgcttcgcgcgccgcctgctcgccgggaacggggacgggggccggctc
ggcgatgacggccggggtctgcacacggatccggaaaatccggtcttctccgccgtcgcc
tccggcggtcaccccaatctcgtgcgtctgcgccgaacctgggatttcgagaagaagcgc
tggttcaccggcatccgcatcgacgaggtgcgtcagctcacacgtttcctgggtcagagc
gccgcgcgcgccggccggcgcgtggtgatcgtcgacgcggccgacgacatgacccgcagc
gccgagaacgccttgctgaagccgctggaggagccgccggccaacaccgtgttcctgctg
gtggcgcaccggcccggcgcgctgctgccaaccatccgttcccgctgccgccgtctcgac
ctgcgcgcgcccgatagcagggaggcgctggaagtcctgcgccgcctgcgcccggacatc
gacgaatccgagcgtgaaatgctgctggcgctggccgaccgctcgccgggccgggcgctg
cgtctcgcggaagcgggcggtgcggagatctaccgccagctcctcgaggtgctggccggt
gcgccggcgatcgagaagggcgcggcgctgcgcctcgcggcgctgaccgacaagggcgcg
gaggcggagcggcgtttcgccattctcggcgatctgatggacggtgtgctgcggcgcatc
gtacttgccggcggcggcgcggctgacatcgcccatccctcggaacaggaggcggagctg
gcccgccgcgcaaggggcggcagtcttgaacattggttcgagttgtgtgaaaacctgcgc
caccttcgggagcgcacggaagcggtcaacctgaaccgcaagacggtgaccctgaccctg
ttttccgcgttcgaggacgccgcacgacgcgccggtctctga
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