Rhizobiales bacterium NRL2: TEF_12275
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Entry
TEF_12275 CDS
T04419
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm00260
Glycine, serine and threonine metabolism
rbm00270
Cysteine and methionine metabolism
rbm00450
Selenocompound metabolism
rbm00670
One carbon pool by folate
rbm01100
Metabolic pathways
rbm01110
Biosynthesis of secondary metabolites
rbm01230
Biosynthesis of amino acids
Module
rbm_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TEF_12275
00270 Cysteine and methionine metabolism
TEF_12275
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
TEF_12275
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TEF_12275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbm04147
]
TEF_12275
Enzymes [BR:
rbm01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
TEF_12275
Exosome [BR:
rbm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
TEF_12275
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Met_gamma_lyase
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ANK81485
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All DBs
Position
2631749..2632912
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AA seq
387 aa
AA seq
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MPELKNRQGFATRAIHAGQRPDPTTGAVMTPIYATSTYVQESPGVHKGFEYSRSQNPTRM
AFEACVADLENGAHGLAFASGMAAMGTVLELLDSGDHVVAMDDLYGGSYRLFENVRKRSA
GLDFSFADLSDPAAFEAAIRPETKMVWVESPTNPLLKLVDLKAIADIARSRGILMVCDNT
FATPYCQQPLEFGADIVVHSITKYINGHSDVVGGVVVIGENPDLKERLYYLQNAVGGILG
PFDSFLALRGVKTLALRMRQHCNSALAIAEHLEAHPGIERVIYPGLPSHPQHELAARQMD
GFGGMVTAFIKGGLADARRFLERCEIFALAESLGGVESLIEHPAIMTHASVPADVRAKLG
ISDTLIRLSVGVEDIDDLIAELDRALG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgaagaaccgccagggcttcgcgacgcgcgcgatccacgccggtcaacgc
ccggatccgacgacgggcgccgtgatgacgccgatctacgccacctcgacctacgtccag
gaaagtcccggcgtccacaagggtttcgagtacagccgttcccagaacccgacacggatg
gcgttcgaagcctgtgtcgccgatctcgagaacggcgcccacggccttgccttcgcgtcc
ggcatggcggcgatgggcaccgtactggagctgctcgacagcggtgatcacgtcgtcgcc
atggacgatctctatggcggcagctaccggctgttcgagaacgtccgcaagcgctccgcc
gggctcgacttcagcttcgccgatctctccgatccggccgccttcgaagccgccatccgg
ccggagacgaagatggtctgggtcgagagtccgaccaatccgctgctgaagctggtggac
ctcaaggcgattgccgacatcgcccggtcccgcggcatcctgatggtctgcgacaacacc
ttcgccacgccctactgccagcagccgctggagttcggcgcggacatcgtcgttcattcg
atcaccaagtacatcaacggccattccgacgtcgtcggcggcgtcgtcgtgatcggcgag
aacccggacctgaaggaacggctctactacctgcagaacgcggtgggcggcatcctggga
ccgttcgattccttcctggcgctgcgcggcgtcaagacgctggcgctgcgcatgcgccag
cactgcaactccgccctggcgatcgccgagcacctggaagctcaccccggcatcgagagg
gtgatctatccgggcctgccgagccatccccagcatgagcttgccgcgcgccagatggac
ggcttcggcggcatggtgacggccttcatcaagggcggactggcggacgcccgccgtttc
ctggaacgctgcgagatcttcgccctggccgagagcctgggcggggtcgagagcctgatc
gagcatccggcgatcatgacccatgcctccgtgccggccgacgtgcgcgccaagctcggc
atttccgatacgctgatccgcctttcggtgggggtcgaggacatcgacgacctgatcgcc
gaacttgaccgggcgctcggctga
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