Rhizobiales bacterium NRL2: TEF_16925
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Entry
TEF_16925 CDS
T04419
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm00300
Lysine biosynthesis
rbm00470
D-Amino acid metabolism
rbm01100
Metabolic pathways
rbm01110
Biosynthesis of secondary metabolites
rbm01120
Microbial metabolism in diverse environments
rbm01230
Biosynthesis of amino acids
Module
rbm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TEF_16925
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TEF_16925
Enzymes [BR:
rbm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
TEF_16925
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ANK82286
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All DBs
Position
complement(3634743..3636056)
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AA seq
437 aa
AA seq
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MNYFDYRGGRLHAEGVPLATIAAEVGTPAYVYSAATLRRHYKVFAGALASAAPGVKHLIC
YSLKANSNQAVIRVLADLGSGADVVSLGELRRALAAGIPGGKIVFSGVGKTAPEMRAALE
AGIRQFNVESEPELEVLAAVADSMGLRAPVAFRVNPDVDAETHAKISTGKKENKFGVPFD
RAREIYRWAATHPSIEIVGVDVHIGSQLTNLTPFERAFAKVADLVHALRDDGHAIRSVDL
GGGLGIPYERNAPWPHPDAYAGVVQRTVGNLGCELIFEPGRMIAGNSGVLMTSVIYVKQG
QDRKFVILDAAMNDLIRPAMYDARHEVMAEREPAPDSAFEKVDLVGPVCESGDMFARDCE
VPPLAAGDIVCFETAGAYGAVMSSTYNTRPLVAEVMVDGDRFAVVRPREDLESLIARDQI
PEWLRGGAARGGSAKGA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaactatttcgattaccgcggcggccggctccatgcggagggcgtgccgctggcgacg
atcgcagccgaggtcggcacaccggcctatgtctattcggcggcgacgctccggcggcac
tacaaggtctttgccggcgccctggccagcgccgcgccgggtgtgaagcatctgatctgc
tattcgctgaaggcgaactccaaccaggccgtgatccgggtgctggccgatctcggctcc
ggcgccgatgtcgtctccctgggcgaactccggcgcgccctggccgccggcattccgggc
ggaaagatcgtcttctccggcgtcggcaagacggccccggagatgcgcgcggcgctggaa
gccggcatccggcagttcaacgtggaaagcgagccggagctggaagtgctcgccgcggtt
gcggactcgatgggcctgcgcgcgccggtcgccttccgcgtcaatccggacgtggacgcg
gaaacccacgccaagatctccaccggcaagaaggagaacaagttcggcgtgccgttcgac
cgcgcccgggagatctaccgctgggcggcaacgcacccgtccatcgagatcgtcggcgtg
gacgtccacatcggctcccaactcaccaacctgacgccgttcgaacgcgccttcgcgaag
gtcgcggatctggtccacgcgctgcgcgatgacggccatgccatccgttcggtcgatctg
ggcggcggtctgggcattccctacgaacgcaacgcgccctggccgcatccggacgcatat
gccggcgtcgtccagcgcacggtcggcaatctgggctgtgagctgatcttcgagccgggc
cggatgatcgccgggaattcgggcgtgctgatgacttcggtgatctacgtcaaacaaggc
caggaccggaaattcgtcatcctcgatgcggcgatgaacgatctcatccgcccggcgatg
tacgatgcccgccatgaggtgatggcggaacgcgagccggcgccggacagcgccttcgag
aaggtcgacctggtcgggccggtctgcgagagcggcgacatgttcgctcgggattgtgaa
gtgccccctctcgccgcgggtgatatcgtctgtttcgagactgcgggcgcctatggcgcg
gtgatgtcgtcgacctacaatacccggccactggtcgccgaggtgatggtggacggcgat
cgtttcgccgtcgtccgtccgcgcgaggatctggaaagcctgatcgcgagggatcagata
ccggagtggctgcgcggcggtgcggcccgggggggctcggcgaaaggagcgtga
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