Rhizobiales bacterium NRL2: TEF_21615
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Entry
TEF_21615 CDS
T04419
Name
(GenBank) biotin carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm00280
Valine, leucine and isoleucine degradation
rbm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
TEF_21615
Enzymes [BR:
rbm01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
TEF_21615
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
GARS_A
ATP-grasp_3
ATPgrasp_ST
ATP-grasp_2
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ANK83105
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Position
4624158..4625618
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AA seq
486 aa
AA seq
DB search
MIKRLLIANRGEIAQRIQRTAKRLGIETVAVHHPVDAGAPWMALSDRTVELQGTPPVQAY
LDMDQIIAAAKQSGADAIHPGFGFLSENARFARAVKDAGLIWVGPDADAIELMGDKQKAR
AFAEKHGVPLAPSAEADDPSKLAEAAAKIGTPLLIKAAAGGGGKGMRIVREDAELKQAIE
SAISEAERAFGDGRVYAERYVDHPRHVEVQVLGDGKKAIHLGTRDCSIQRRFQKIVEEAP
APALPDGLLREIEATAVKLAEACNYRNAGTVEFIVAPDGAFYFLEMNTRLQVEHPVTEEI
TGVDLVAEQLAIAAGGELRFSQADIRFEGHSVEVRIYAEDADAGFLPAAGTLLLLEPPAG
VRWESGIETGGEVTADFDPMIAKLVVSGPTREAAVRACAQAVGKLTALGVTTNQFFLKRV
LEHPAFMAAEVHTGFIDEHGEALALAPLAPETRDRLALRALAACAGPTAAPERALPIQEA
AGDWRN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcgactcctgatcgccaatcgcggcgagatcgcccagcgcatccagcgcacg
gccaaacgcctcggcatcgagaccgtcgccgtccatcatcccgtcgacgccggcgcaccg
tggatggcgctgtcggaccggaccgtcgaactgcagggcaccccgccggtccaggcctat
ctggacatggaccagatcatcgccgcggcgaaacagagcggcgcggacgccatccacccc
ggcttcggcttcctgtcggagaacgcccgcttcgcccgcgccgtcaaggacgccggcctg
atctgggtcgggccggacgcggacgcgatcgaactgatgggcgacaagcagaaggcccgc
gccttcgccgagaagcatggcgtcccgctggccccttccgccgaggccgacgatccgtcg
aagctggccgaggcggcggcgaagatcggcacgccgctgctgatcaaggcggcggccggc
ggcggcggcaagggcatgcgcatcgtccgcgaggacgccgagctgaagcaggccatcgaa
tccgcgatttccgaggccgagcgcgccttcggcgacggccgcgtctacgccgagcgctat
gtcgaccatccgcgccatgtcgaggtgcaggtgctgggcgacggcaagaaggcgatccac
ctcggcacccgcgactgctcgatccagcgccgtttccagaagatcgtcgaggaagcgccg
gcccccgccctgcccgacgggctgttgcgggagatcgaggcaacggcggtgaagctcgcg
gaagcctgcaattaccgcaatgccggcacggtggagttcatcgtggcgcccgacggcgcc
ttctacttcctggagatgaacacccgcctgcaggtggagcatccggtaaccgaggagatc
accggcgtcgacctggtggcggaacaactcgccatcgccgcgggcggggaactcaggttc
tcccaggccgatatccgcttcgagggccattcggtcgaggtccgtatctatgccgaggac
gccgacgccggcttcctgccggcggccggaaccctgctcctgctggagccgccggcgggc
gtgcgctgggagagcggaatcgagaccggcggcgaggttaccgccgacttcgatccgatg
atcgccaagctggtcgtctccggcccgacgcgggaggctgcggtccgcgcctgcgcgcag
gctgtcggcaaactgacggcgctgggcgtcaccaccaaccagttcttcctgaagcgggtg
ctggagcatccggccttcatggccgccgaagtccataccggcttcatcgacgagcacggc
gaagctctcgcccttgccccgctggccccggagacgcgggaccggctggcgctgcgcgcg
ctggccgcatgcgccgggccgacggcggcgccggaacgcgcgcttccgatccaggaagcc
gccggcgactggaggaactga
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