Rhizobiales bacterium NRL2: TEF_21655
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Entry
TEF_21655 CDS
T04419
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rbm
Rhizobiales bacterium NRL2
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbm03400
]
TEF_21655
Enzymes [BR:
rbm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
TEF_21655
DNA repair and recombination proteins [BR:
rbm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TEF_21655
Prokaryotic type
TEF_21655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ANK83111
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All DBs
Position
4634275..4635711
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AA seq
478 aa
AA seq
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MSEKPILHWFRRDLRLDDNPGLDAAARSGRPVIALFILDDESPGPWRMGGASRWWLHHSL
EALATEMHRRNNRLILRRGRADDAMDAVIEETGADAVTWNRLYDPWAVARDRRIKTALKD
RGLDVRSFPGNLAFEPWTIAAGAGEPYKVFTPFLKACLAAGPPAEPLPPPERIAVPGRWP
ASDELADWGLTPAKPDWAGGLREAWTPGEAGARARFETFLDEKLDDYAAGRDAPARDVTS
RLSPHLHFGEISVRRIWRALDHRERSGVPGAAKFRAEVIWREFSHHLLWHWPDLPEANWR
ARFDGFPWADDPEALAAWQAGRTGYPLVDAGMRELWATGYMHNRVRMVAASFLIKDLLID
WREGEKWFWDTLCDADLANNAAGWQWVAGSGADAAPYFRIFNPAKQSEDHDPDGDYIRRW
VPELGALPAKHIHAPWKAPAEVLDAAGVRLGETYPRPIVDHGQARGRALEAYQQVKAS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
ctgtccgagaagcccatcctccactggttccgccgcgacctgcgcctcgacgacaatccc
ggcctcgacgccgcggcccgctcaggccggccggtcatcgcgcttttcatcctggatgac
gagagcccgggcccgtggcgcatgggcggcgcctcgcgctggtggctgcaccattccctc
gaagcgctggcgacggagatgcacaggcgcaacaaccgcctgatcctgcgccggggccgc
gcagacgacgccatggacgcggtgatcgaggagaccggcgccgacgcggtcacgtggaac
cggctctacgacccctgggcggtcgctcgcgaccggcggatcaagaccgcgctgaaggac
cgcggtctcgacgtccgcagctttcccggcaatctcgccttcgagccctggaccatcgcg
gccggcgcgggcgagccctacaaggtcttcacgcccttcctgaaggcctgcctcgccgcc
gggccgccggccgagcccctgccgccgccggagcgcatcgccgttcccggccgctggccg
gccagcgacgaactcgccgactggggtctgacgcccgcgaagcccgactgggcaggcggg
ttgcgagaggcatggacgcccggcgaggccggcgccagggcccgtttcgagaccttcctg
gacgagaagctggacgactatgcggcggggcgggatgcgccggcgcgcgatgtcacctcc
cgtctttcaccgcacctccatttcggcgagatctcggtccgccggatctggcgcgcgctg
gaccaccgggagcgatcgggcgtgccgggtgcggcgaagttccgcgccgaggtcatctgg
cgggagttcagccaccacctgctctggcactggcccgacctgccggaagcgaactggcgg
gcgcgtttcgacggtttcccctgggccgatgacccggaagcactcgcagcctggcaggca
ggccgcacaggctatccgcttgtcgacgccggcatgcgggagctctgggccaccggctac
atgcacaaccgggtgcgcatggtcgccgccagcttcctgatcaaggacctgctgatcgac
tggcgcgaaggggagaagtggttctgggacacgctctgcgacgccgatctcgccaacaac
gccgcgggctggcagtgggtggcgggctccggcgccgacgccgcgccctatttccgcatc
ttcaaccccgcgaagcagtccgaggaccacgacccggacggcgactacatccgccgctgg
gtgccggagctcggggcgctgccggcgaagcacattcacgcgccctggaaggcgccggcg
gaggttctcgacgccgcgggcgtccgtctcggcgagacctatccccgccccatcgtcgat
cacggccaggcgcggggacgcgccctcgaagcgtatcagcaggtgaaggccagctga
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