Rubrivivax benzoatilyticus: RBXJA2T_00230
Help
Entry
RBXJA2T_00230 CDS
T04092
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rbn
Rubrivivax benzoatilyticus
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbn03400
]
RBXJA2T_00230
DNA repair and recombination proteins [BR:
rbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RBXJA2T_00230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
ResIII
AAA_16
TrwB_AAD_bind
T2SSE
AAA_30
FtsK_SpoIIIE
AAA_10
AAA_19
CbiA
AAA_7
AAA_28
SRP54
Chal_sti_synt_C
nSTAND3
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
EGJ08719
LinkDB
All DBs
AA seq
505 aa
AA seq
DB search
MSEPILVARHGDVVCELLPALANRHGLITGATGTGKTITLQKLAESFSQLGVPVFMADVK
GDLTGITQRGSVSPKLAAVLAERGLDTPEPFACPTTLWDVFGEQGHPVRATVSDMGPLLL
SRMLALNETQQGVLNLVFKIADDQGLALLDMKDLRAMLQHVGENAREFTTEYGNVSSASI
GAIQRGLLQIEEQGGDRFFGEPMLDIADFMQTVNGHGVVNILAADKLLNAPRLYATFLLW
MLSELFEALPEVGDLDKPKLVFFFDEAHLLFKDAPAVLVERIELVVRLVRSKGVGVYFVT
QNPLDVPETVLAQLGNRVQHALRAFSPRDLKAVKAAAETMRANPKLGDLTTAITELGVGE
ALVSFLDAKGRPSVTERVFVLPPGSRIGPVTPAERQALIAGSLVAGVYEKTVDRESAYER
LKGRATTAPAATAGLPPGAQAPAEGGGLLDGLKDTLFGSTGPRGGKREGLAEAAARSAMR
SIGSAVGRELIRGVLGSLVGGSRRR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccgatcctcgtcgcccgccacggcgacgtcgtctgcgagctgctgcccgcg
ctcgccaaccgccacggcctgatcaccggcgccaccggcaccggcaagacgatcacgctg
cagaagctcgccgagagcttcagccaactcggcgtgccggtcttcatggccgacgtgaag
ggcgacctgaccggcatcacccagcgtggcagcgtctcgcccaagctcgccgcggtgctg
gccgaacgcggcctggacacgcccgagcccttcgcctgcccgacgacgctgtgggacgtc
ttcggcgagcagggccacccggtgcgcgccaccgtctccgacatggggccgctgctgctg
tcgcgcatgctggcgctcaacgagacccagcagggcgtgctgaacctggtgttcaagatc
gccgacgaccagggcctggcgctgctggacatgaaggacctgcgcgcgatgctgcagcac
gtcggcgagaacgcgcgcgagttcaccaccgagtacggcaacgtcagcagcgccagcatc
ggcgccatccagcgcggcctgctgcagatcgaggaacagggcggcgaccgcttcttcggc
gagccgatgctcgacatcgccgacttcatgcagaccgtgaatggccacggtgtcgtcaac
atcctcgccgccgacaagctgctgaacgcgccgcgcctgtacgccaccttcctgctgtgg
atgctgtcggagctgttcgaggcgctgcccgaggtcggcgacctggacaagcccaagctc
gtgttcttcttcgacgaggcgcacctgctgttcaaggacgcgccggcggtgctggtcgag
cgcatcgagctcgtcgtgcgcctggtgcgcagcaagggcgtcggcgtctacttcgtcacc
cagaacccgctggacgtgcccgagacggtgctcgcgcagctcggcaaccgcgtgcagcac
gcgctgcgcgccttctcgccgcgcgacctgaaggcggtgaaggcggccgccgagacgatg
cgcgccaaccccaagctcggcgacctgacgacggcgatcaccgagctcggtgtcggcgag
gcgctggtcagcttcctcgacgccaagggccggcccagcgtcaccgaacgcgtcttcgtg
ctgccgccgggcagccgcatcggcccggtgacgccggccgagcgccaggcgctgatcgcc
gggtcgctggtggccggcgtctacgagaagaccgtcgaccgcgagtcggcctacgaacgg
ctgaagggccgcgccacgacggccccggccgccaccgccggcctgccgccgggcgcccag
gcaccggcggaaggcggcggcctgctggacgggctcaaggacacgctgttcggcagcacc
ggcccgcgtggcggcaagcgcgaaggcctggccgaagccgcggcacgttcggcgatgcgc
agcatcggctcggccgtcggccgcgagctgatccgcggcgtgctcggttcgctggtcggc
ggcagccggcggcgctga
DBGET
integrated database retrieval system
