KEGG   Rubrivivax benzoatilyticus: RBXJA2T_01105
Entry
RBXJA2T_01105     CDS       T04092                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rbn  Rubrivivax benzoatilyticus
Pathway
rbn00300  Lysine biosynthesis
rbn00470  D-Amino acid metabolism
rbn01100  Metabolic pathways
rbn01110  Biosynthesis of secondary metabolites
rbn01120  Microbial metabolism in diverse environments
rbn01230  Biosynthesis of amino acids
Module
rbn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rbn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RBXJA2T_01105
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RBXJA2T_01105
Enzymes [BR:rbn01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     RBXJA2T_01105
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: EGJ08890
LinkDB
AA seq 424 aa
MTLPGHPHLVRDADGELRLEGHSLADLARRHGTPLYVYSRTAMLDALAGYQRALEGLPHL
ICYAIKANSNLAVLQTFARAGCGFDIVSGGELERVLAAGAEPSKIVFSGVGKTAAEMRRA
LEVGVHCFNVESLGELERLAEVAAAMGRRAPVSLRVNPDVDAGTHPYISTGLKDNKFGIP
HDEALAVYRRAAALPSLQVVGIDCHIGSQITQLEPYLDALGRVLDLVEAVEAEGIALAHV
DVGGGLGITYTDEAPPSPETLVRGLADLMRARGHGHRQLLVEPGRSLVGNAGVLLAEVQY
LKPGETKNFCIVDAAMNDLVRPAMYEAWMAIEPCRPGADTVAATWDVVGPVCESGDWLGR
DRRLAVAPGDIVAVLSAGAYGMAMAGNYNSRPRAAEILLDGDAVHVVREREDTRALFALE
RLLA
NT seq 1275 nt   +upstreamnt  +downstreamnt
gtgacgctgcccggccacccccacctggtgcgcgacgccgacggcgagctgcggctggaa
ggccattcgctggccgacctggcgcgccgccacggcacgccgctgtacgtctactcgcgc
acggcgatgctcgacgcgctcgccggctaccagcgtgcgctcgagggcctgccgcacctg
atctgctacgcgatcaaggccaactccaacctcgccgtgctgcagaccttcgcgcgcgcc
ggctgcggcttcgacatcgtctccggcggcgagctggagcgggtgctggccgccggcgcc
gagccgtcgaagatcgtgttctccggcgtcggcaagaccgccgccgagatgcgccgcgcg
ctcgaggtcggcgtgcactgcttcaacgtcgagagcctgggcgagctggagcgcctggcc
gaggtcgccgcggcgatgggccggcgcgcgccggtcagcctgcgcgtcaaccccgacgtc
gacgccggcacccacccctacatctcgaccgggctgaaggacaacaagttcggcatcccg
cacgacgaggcgctggccgtctaccgccgcgccgccgcgctgccgtcgctgcaggtcgtc
ggcatcgactgccacatcggctcgcagatcacgcagctcgaaccctatctcgacgcgctc
ggccgcgtgctcgacctcgtcgaagcggtcgaggccgaaggcatcgcgctggcccacgtc
gacgtcggcggcggcctgggcatcacctacaccgacgaggcgccgccctcgcccgagacg
ctggtgcgcggcctcgcggacctgatgcgcgcacgcggccacggccaccgccagttgctc
gtcgagcccgggcgctcgctggtcggcaacgccggcgtgctgctggcggaggtgcagtac
ctgaagcccggcgagacgaagaacttctgcatcgtcgacgcggcgatgaacgacctcgtg
cgcccggcgatgtacgaggcctggatggcgatcgagccctgccgtcccggcgccgacacc
gtggccgccacctgggacgtcgtcggcccggtctgcgagtcgggcgactggctgggccgc
gaccgcaggctggccgtcgcgccgggcgacatcgtcgccgtgctgtccgccggcgcctac
ggcatggcgatggccggcaactacaacagccgcccgcgcgccgccgagatcctgctcgac
ggcgacgccgtgcacgtcgtgcgcgaacgcgaggacacccgggcgctgttcgcgctcgaa
cgcctgctcgcctag

DBGET integrated database retrieval system