Rubrivivax benzoatilyticus: RBXJA2T_02627
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Entry
RBXJA2T_02627 CDS
T04092
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rbn
Rubrivivax benzoatilyticus
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbn03032
]
RBXJA2T_02627
Enzymes [BR:
rbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RBXJA2T_02627
DNA replication proteins [BR:
rbn03032
]
Prokaryotic type
DNA Topoisomerases
RBXJA2T_02627
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Zn_ribbon_PADR1
DUF3945
Zn_Ribbon_YjdM
DUF5323
IBR_2
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
EGJ09190
LinkDB
All DBs
AA seq
864 aa
AA seq
DB search
MTKTLIIAEKPSVAQDIARALTPVAGKFEKHADHFENDQYVVTSAVGHLVEIKAPEAYDV
KRGKWSFAHLPVVPPHFELAPIDKSKSRLSAVVKLVKRKDVTDLVNACDAGREGELIFRL
IVQYAAAGKPFSKPIRRLWLQSMTPQAIRDGFDKLRSDEQMQGLADAARSRSEADWLVGI
NGTRAMTAFNSRDGGFFLTTVGRVQTPTLSIVVEREEKIRKHVARDYWEVRAAFDAQAGQ
YEGKWFDPKWKKNPDDAEARADRLWNEADAQAIAAAVRGQPATVTEEAKPSSQSSPLLYD
LTTLQREANSRFGFSAKTTLSIAQALYEKHKVLTYPRTDSRALPEDYVGVVKQTFAMLAD
EELPGPLAALSQHARKGLDAGYVKPTKRVFDNTKVSDHFAIIPTLQAPKSLTEIEAKLYD
LVVKRFIAVFYPAAEYMVTTRISKVAVAEATHHFQTNGKVLVNPGWLAVYGKEAQDEDAN
LVPVTQGETVRTEGVDVKQLKTKPPARYTEATLLSAMEGAGKLIDDDELRQAMAEKGLGT
PATRAAIIEGLILEKYMLREGRELQPTAKAFQLMTLLRGLAIEDLTKPELTGNWEYQLSQ
MEHGKLSRERFMAEIAKMAERIVKKAKEYDRDTIPGDYATLSTPCPNCGGVVKENYRRFA
CTGAAGSPEGSGCGFSITKLPAGRTFEVAEADALLRDKRLGPLDGFRSKAGWPFSAELRI
VHDDEIGNWKLEFDFGDDDKPAEGEGEPVDFSGQQSLGPCPKCRSHVYEHGSSYVCEHAV
GAHTTCDFKSGAVILQQPVTHEEMTRLLTTGRTKLLEDFVSNKTKRKFKAFLVYDAKEGK
VGFEFEPRAARPPAKKAPARKTAA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagactctcatcattgcggagaagcccagcgtcgcgcaggacatcgcgcgagcg
ctgacgccggtggccggcaagttcgaaaaacacgccgaccatttcgagaacgaccagtac
gtcgtgacctcggcggtcggccacctcgtggagatcaaggcccccgaggcctacgacgtc
aaacgcggcaagtggagctttgcccacctgccggtggtgccgccgcatttcgagctggcg
ccgatcgacaagtccaagtcgcggctgtcggcggtggtcaagctggtcaagcgcaaggac
gtcaccgacctcgtcaacgcctgtgacgcggggcgcgagggcgagctgatcttccgcctg
atcgtccagtacgccgcggccggcaagccgttcagcaagccgatccgccgcctgtggctg
cagagcatgacgccgcaggccatccgcgacggcttcgacaagctgcgcagcgacgagcag
atgcagggcctggccgacgccgcgcgcagccgctccgaagcggactggctggtcggcatc
aacggcacgcgcgcgatgacggccttcaactcgcgcgacggcggtttcttcctcaccacg
gtgggccgggtgcagacgccgacgctgtcgatcgtcgtcgagcgcgaggagaagatccgc
aagcacgtcgcacgcgactactgggaggtgcgcgccgccttcgacgcccaggccgggcag
tacgagggcaagtggttcgacccgaagtggaagaagaaccccgacgatgccgaagcgcgt
gccgaccggctgtggaacgaagcggatgcccaggccatcgccgccgcggtgcgcggccag
ccggccaccgtcaccgaggaggccaagcccagctcgcagagcagcccgctgctgtacgac
ctgacgacgctgcagcgcgaggccaactcgcgcttcggcttctcggccaagaccacgctg
tcgatcgcccaggcgctgtacgagaagcacaaggtgctgacctacccgcggaccgactcg
cgcgcgctgcccgaggactacgtcggcgtcgtcaagcagaccttcgcgatgcttgccgat
gaagagctgccggggccgctggcggcgctgtcgcagcatgcgcgcaagggcctggacgcc
ggctacgtgaagccgaccaagcgggtcttcgacaacaccaaggtctcggaccacttcgcc
atcatcccgacgctgcaggccccgaagagcctgaccgagatcgaggccaagctctacgac
ctggtcgtcaagcgtttcatcgccgtgttctatccggcggccgagtacatggtcacgacg
cgcatcagcaaggtcgcggtggccgaggcgacgcaccacttccagaccaacggcaaggtg
ctggtcaatccgggctggctggccgtctacggcaaggaagcccaggacgaggacgccaac
ctcgtgccggtgacgcagggcgagaccgtgcgcaccgagggcgtggacgtcaagcagctg
aagaccaagccgccggcgcgctacaccgaggcgacgctgctgtcggcgatggaaggcgcg
ggcaagctgatcgacgacgacgagctgcgccaggcgatggccgagaagggcctgggcacg
ccggccacgcgcgccgcgatcatcgaaggcctgatcctcgagaagtacatgctgcgcgag
ggccgcgagctgcagcccaccgccaaggccttccagctgatgacgctgctgcgcggcctg
gcgatcgaggacctgaccaagcccgagctgaccggcaactgggagtaccagctgtcgcag
atggagcacggcaagctgagccgagagcgtttcatggccgagatcgccaagatggccgag
cgcatcgtcaagaaggccaaggagtacgaccgcgacacgatccccggcgactacgcgacc
ttgtcgacgccgtgcccgaactgcggcggcgtggtcaaggagaactaccgccgcttcgcc
tgcaccggcgccgccggttcgcccgagggcagcggctgcggcttcagcatcaccaagctg
ccggccggccgcaccttcgaggtcgccgaggccgatgcgctgctgcgcgacaagcgcctg
ggcccgctggacggcttccgctccaaggccggctggccgttcagcgccgagctgcgcatc
gtgcacgacgacgagatcggcaactggaagctggagttcgacttcggcgacgacgacaag
cctgccgaaggcgagggcgagccggtggacttcagcggccagcagagcctgggcccgtgc
ccgaagtgccgcagccacgtctacgagcacggcagcagctacgtctgcgaacacgccgtc
ggcgcgcacacgacctgcgacttcaagagcggtgccgtgatcctgcagcagcccgtcacc
cacgaggagatgacgcgcctgctgaccaccggccgcaccaagctgctcgaggacttcgtc
tcgaacaagaccaagcgcaagttcaaggccttcctcgtctacgacgccaaggaaggcaag
gtcggcttcgagttcgagccgcgtgccgcgcggccgccggcgaagaaggcgccggcacgc
aagaccgcggcgtga
DBGET
integrated database retrieval system
