Rubrivivax benzoatilyticus: RBXJA2T_03091
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Entry
RBXJA2T_03091 CDS
T04092
Name
(GenBank) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBXJA2T_03091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbn03400
]
RBXJA2T_03091
Enzymes [BR:
rbn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RBXJA2T_03091
DNA repair and recombination proteins [BR:
rbn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBXJA2T_03091
Prokaryotic type
RBXJA2T_03091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
EGJ09282
LinkDB
All DBs
AA seq
226 aa
AA seq
DB search
MTADELPAAFATLPPAWRAVLPGWTPAAEAAVVERVRAVSGAREIGPPDPFRALRLVSPE
AARVVILGQDPYPRPGHADGMAFSAGHGKPHSLRRIFDVLASDRPAWQRPADWCLDPWAV
QGVLLLNPVLTVEIGAAGSHMSCGWQVLTSEIISVLCRRAEPPAFLLWGKPANAFFDAAC
PPGCTPPVWRTRHPSHDFKREFMADGSHFAATADRVDWWGGAGISR
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgacgaactgccggcggcgttcgcgacgctgccgccggcctggcgcgccgtg
ctgcccggctggacgccggcggccgaggcggcggtcgtcgagcgcgtgcgcgccgtgtcg
ggcgcgcgcgagatcggtccgccggatccgttccgggcccttcgcctcgtgtcgcccgag
gcggcgcgtgtcgtcatcctcggtcaggacccgtacccgcggccgggccatgcggacggc
atggcgttctcggccggccatggcaaaccccactcgttgcgtcggatattcgacgtgctg
gccagcgaccgcccggcctggcagcgaccggcggactggtgcctggacccgtgggcggtg
cagggcgtgctgctgctgaacccggtgctgaccgtcgagatcggcgctgccggcagccac
atgagttgtggttggcaggtgctcacatccgaaatcatctcggtgctgtgtcgccgcgcg
gagccgccggccttcctgctgtggggcaagccggcgaacgccttcttcgatgccgcctgc
ccgcccggctgcacgccgccggtctggcgcacgcgccacccctcgcacgacttcaaacgc
gagttcatggccgacggcagtcacttcgccgccacggccgatcgtgtcgactggtgggga
ggggctggtatttcccgctga
DBGET
integrated database retrieval system
