KEGG   Rubrivivax benzoatilyticus: RBXJA2T_03623
Entry
RBXJA2T_03623     CDS       T04092                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rbn  Rubrivivax benzoatilyticus
Pathway
rbn00300  Lysine biosynthesis
rbn00470  D-Amino acid metabolism
rbn01100  Metabolic pathways
rbn01110  Biosynthesis of secondary metabolites
rbn01120  Microbial metabolism in diverse environments
rbn01230  Biosynthesis of amino acids
Module
rbn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rbn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RBXJA2T_03623
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RBXJA2T_03623
Enzymes [BR:rbn01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     RBXJA2T_03623
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: EGJ09386
LinkDB
AA seq 415 aa
MNEPIPRAVPVHAPMDQFPVRDGELVVGGERLSLLAARVGATPFYAVDRGLLRRRVAELR
AALPAGVKLHYAMKANPMPALVAFMAGLVDGIDVASGGELKVALDAGADAAEVSFAGPGK
RDAELRQAVAARVLVNVESERELAVLAAAAAEFGVPARVAVRVNPDFELKGSGMRMGGGA
KQFGVDADRVPALLARIGELGLAFEGFHLFAGSQNLRAEAICEAQRQSYELALRLAAHAP
APLRFLNLGGGFGIPYFPGETRLDLAPIGANLQALAERARTELPEASLVIELGRYFVGEA
GVYVTRVVDRKLSRGQVFLVCDGGLNHHLAASGNFGQVVRKNYPVTVGNRLGDEARETAT
AVGPLCTPLDLLADRMSLPPADVGDLVVVFQSGAYGASASPQAFLGHAPVTEVLV
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaacgaaccgattccccgcgccgtcccggtgcatgcgccgatggaccagttcccggtg
cgcgacggcgagctcgtcgtcggcggcgagcgcctgagcctgctggccgcgcgtgtcggc
gcgacgccgttctacgccgtcgaccgcggcctgctgcgccggcgtgtcgccgagctgcgc
gcggcgctgccggccggcgtcaagctgcactacgcgatgaaggccaacccgatgccggcg
ctggtcgccttcatggccgggctggtcgacggcatcgacgtcgcctccggcggcgagctg
aaggtggcgctggatgccggtgccgatgcggccgaggtcagcttcgccgggccgggcaaa
cgcgacgccgagctgcgccaggcggtggcggcgcgggtgctggtcaacgtcgagtccgaa
cgtgagctggcggtgctggccgcggcggcggccgagttcggcgtgccggcgcgggtggcg
gtgcgcgtgaaccccgacttcgagctgaagggctcgggcatgcgcatggggggtggcgcg
aaacagttcggcgtcgacgccgaccgcgtgccggcgctgctggcgcgcatcggcgagctg
gggctggcgttcgagggcttccacctgttcgccggctcgcagaacctgcgcgccgaggcg
atctgcgaggcccagcgccagtcctacgaactcgcgctgcggctggccgcgcacgcgccg
gcgccgctgcgtttcctgaacctgggcggcggtttcggcatcccgtacttccccggcgag
acccggctggacctggcgccgatcggcgccaacctgcaggcgctggccgagcgtgcgcgc
accgagctgcccgaggccagcctcgtcatcgagctcggccgctacttcgtcggcgaggcc
ggcgtctatgtcacgcgggtcgtcgaccgcaagctgtcgcgcgggcaggtcttcctggtc
tgcgacggcggcctgaaccaccacctcgcggccagcggcaacttcggccaggtggtgcgc
aagaactatccggtgacggtgggcaaccgcctcggcgacgaggcccgcgagaccgccacc
gccgtcggcccgctgtgcaccccgctggacctgctggccgaccgcatgagcctgcccccg
gccgacgtcggcgacctcgtcgtcgtcttccagtccggcgcctacggcgccagcgccagc
ccgcaggccttcctcggccacgcccccgtcaccgaggtgctcgtctaa

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