Rubrivivax benzoatilyticus: RBXJA2T_03828
Help
Entry
RBXJA2T_03828 CDS
T04092
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
rbn
Rubrivivax benzoatilyticus
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbn03400
]
RBXJA2T_03828
Enzymes [BR:
rbn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RBXJA2T_03828
DNA repair and recombination proteins [BR:
rbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RBXJA2T_03828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
EGJ09427
LinkDB
All DBs
AA seq
511 aa
AA seq
DB search
MRHLVLVLGDQLDAEAAAFDGFDTEHDAVWMAEVDEESTHVPSSQPRTALFLAAMRHFAA
ALQAAGRRVHYTRLDDAGNRGRLADELDATIERLQPQALVMTAPGDHRVLRALQAVAASH
GLPLELRPDRHFFCTVREFAAHARSRRTLRLEFFYREQRRRHGVLMDGGEPCGGRWNYDA
DNREAFGRDGPPPHAEPPRFAPDAMTREVLDLVRRRFAGHPGRLDSFAWPVTREQALHAL
QRFVAERLAGFGRWQDALWPGEPWLWHSQLSAALNLKLLDPHEVVAAAEAAYRAGRVPLE
SAEGFIRQILGWREYVRGVYWTRMPGYAELNAWDAHEPLPAFYWSGDTPMACLADAIVQT
LEHGYAYHIQRLMVTGLYALLLGVEPKEVHAWYLAVYVDAVEWVELPNTLGMSQNADGGL
MASKPYVASGRYIERMSAGRLCAGCRFRPGERTGDTACPFTTLYWDFLLRHEARLATNPR
MVMPLKHLTRLDAAERARIGERAAALRAGGF
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatctggtgctggtgctcggcgaccagctcgacgccgaggccgcggccttcgac
ggtttcgacaccgagcacgacgcggtgtggatggccgaggtcgacgaggaatcgacccac
gtgccgtcgagccagccgcgcacggcgctgttcctcgcggcgatgcgccacttcgccgcc
gcgctgcaggccgccggccggcgcgtgcactacacacggctggacgacgccggcaaccgc
ggccgcctggccgacgaactggacgccacgatcgagcgcctgcagccccaggcgctggtg
atgaccgcgcccggcgaccaccgcgtgctgcgcgcgctgcaggccgtggccgcgtcgcac
ggcctgccgctggagctgcgccccgaccgccatttcttctgcacggtgcgcgagttcgcc
gcccacgcacgcagccggcgcacgctgcggctggagttcttctaccgcgagcaacgccgc
cgccacggcgtgctgatggacggcggcgagccctgcggcgggcgctggaactacgacgcc
gacaaccgcgaggctttcggccgcgacggcccgccgccgcacgccgagccgccacgtttc
gcgcccgacgcgatgacacgcgaagtgctggacctggtgcggcgccgcttcgccggccac
cccgggcggctggactccttcgcctggccggtgacacgcgagcaggccttgcacgcgctg
cagcgtttcgtcgccgagcgcctggccggcttcggccgctggcaggacgcgctgtggccc
ggcgagccgtggctctggcactcgcagctctcggcggcgctgaacctcaagctgctggac
ccgcacgaggtcgtggccgcggccgaagctgcctaccgcgccggccgggtgccgctggag
agcgccgaaggtttcatccgccagatcctcggctggcgcgagtacgtgcgcggcgtctac
tggacgcgcatgccgggctacgccgagctgaacgcctgggacgcgcacgagccgctgccg
gccttctactggagcggcgacacgccgatggcctgcctggccgacgccatagtccagacg
ctggagcacggctacgcgtaccacatccagcgcctgatggtcaccgggctgtacgcgctg
ctgctcggcgtcgagccgaaagaggtgcacgcctggtacctggcggtctacgtcgacgcc
gtcgagtgggtggagctgccgaacacgctgggcatgagccagaacgccgacggcggcctg
atggccagcaagccctatgtcgccagcggccgctacatcgagcgcatgagcgccggccgg
ctgtgcgccggctgccgcttccgccccggcgagcgcaccggcgacaccgcctgcccgttc
acgacgctgtactgggacttcctgctgcgccacgaggccaggctggccaccaacccgcgc
atggtgatgccgctgaagcacctgacgcgcctcgacgcggccgagcgggcgcgcatcggc
gaacgtgcggcggcgctgcgggcgggaggtttctga
DBGET
integrated database retrieval system
