Rubrivivax benzoatilyticus: RBXJA2T_06470
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Entry
RBXJA2T_06470 CDS
T04092
Name
(GenBank) putative ATP-dependent RNA helicase 2
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBXJA2T_06470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbn03019
]
RBXJA2T_06470
Enzymes [BR:
rbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RBXJA2T_06470
Messenger RNA biogenesis [BR:
rbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBXJA2T_06470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
EGJ09951
LinkDB
All DBs
AA seq
483 aa
AA seq
DB search
MTDSTADSAAATSAPAPLFDTLALDPKLLRAVADAGYRAMTPIQAKAIPIVLDGRDVMGA
AQTGTGKTAAFTIPLLQKMLRHENTSMSPARHPVRALVLAPTRELADQVAANVKTYAKHT
RLRSAVVFGGVDMKPQTAELKAGVEVLIATPGRLLDHIEARNAVLNQVEYVVLDEADRML
DIGFLPDLQRILSFLPKTRQTLLFSATFSPEIKRLAGSYLQDPVTVEVARPNATASTVEQ
RFYGVGDDDKRATVRQILRQRELSQAIVFVNSKLGAARLARSFERDGLKTQALHGDKSQD
ERLKALAAFKAGEVDLLVATDVAARGLDIADLPAVFNFDVPFNAEDYVHRIGRTGRAGAS
GLAVTLVTRDDTRLIGDIEKLIKKKIEIEPFEIEDDRARRPRRRFDEERELAPRAESVER
APRRAAQPPADPIFDRPYEPSPSAAPAASDAAPAAPAAAPARAAASPNIRPKRKVAALLG
GGR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattccactgcggacagcgcggctgccacgagcgccccggcgccgctcttcgac
accctcgccctcgaccccaagctcctgcgcgccgtcgccgacgccggctaccgggccatg
accccgatccaggccaaggcgatccccatcgtcctggacggccgcgacgtgatgggcgcg
gcgcagaccggcaccggcaagaccgccgccttcacgatcccgctgctgcagaagatgctg
cggcacgagaacaccagcatgtccccggcgcgccacccggtgcgcgcgctggtgctggcg
ccgacgcgcgagctggccgaccaggtggccgccaacgtcaagacctacgccaagcacacc
cggctgcgttcggcggtggtcttcggcggcgtcgacatgaagccgcagaccgccgagctg
aaggccggcgtcgaggtgctgatcgccacgccgggccggctgctcgaccacatcgaggcc
cgcaacgcggtgctcaaccaggtcgagtacgtcgtgctcgacgaagccgaccgcatgctc
gacatcggcttcctgcccgacctgcagcgcatcctgtcgttcctgcccaagacgcggcag
acgctgctgttctcggccaccttctcgcccgagatcaagcgtctggccggcagctacctg
caggacccggtgacggtcgaggtcgcgcggcccaacgccaccgcctccaccgtcgagcag
cgcttctacggcgtcggcgacgacgacaagcgcgccaccgtgcgccagatcctgcgccag
cgcgagctgtcgcaggccatcgtcttcgtcaacagcaagctcggcgcggcgcgcctggcg
cgctcgttcgagcgcgacggtctgaagacccaggcgctgcacggcgacaagagccaggac
gagcgcctgaaagcgctggccgcgttcaaggccggcgaggtcgacctgctcgtggccacc
gacgtcgccgcgcgcggcctggacatcgccgacctgccggcggtcttcaacttcgacgtg
ccgttcaatgccgaggactacgtgcaccgcatcggccgcaccggccgcgccggcgcgtcg
ggcctggcggtgacgctggtcacgcgcgacgacacgcggctcatcggcgacatcgagaag
ctgatcaagaagaagatcgagatcgagcccttcgagatcgaggacgaccgtgcgcgccgc
ccgcgccgccgtttcgacgaggagcgcgagctggcgccgcgtgccgaatcggtcgagcgc
gccccgcgccgcgccgcgcagccgccggccgacccgatcttcgaccggccctacgagccg
tcgccgtcggcggcgcccgccgcctccgacgccgcgccggccgccccggcagcggccccg
gcacgtgcggcggcctcgcccaacatccgccccaagcgcaaggtcgccgcgctgctcggc
ggcggccgctga
DBGET
integrated database retrieval system
