Rubrivivax benzoatilyticus: RBXJA2T_07573
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Entry
RBXJA2T_07573 CDS
T04092
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn00061
Fatty acid biosynthesis
rbn00071
Fatty acid degradation
rbn01100
Metabolic pathways
rbn01212
Fatty acid metabolism
rbn02024
Quorum sensing
rbn04146
Peroxisome
Module
rbn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RBXJA2T_07573
00071 Fatty acid degradation
RBXJA2T_07573
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RBXJA2T_07573
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBXJA2T_07573
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rbn01004
]
RBXJA2T_07573
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbn04147
]
RBXJA2T_07573
Enzymes [BR:
rbn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RBXJA2T_07573
Lipid biosynthesis proteins [BR:
rbn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RBXJA2T_07573
Exosome [BR:
rbn04147
]
Exosomal proteins
Exosomal proteins of breast milk
RBXJA2T_07573
Exosomal proteins of breast cancer cells
RBXJA2T_07573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
EGJ10170
LinkDB
All DBs
AA seq
569 aa
AA seq
DB search
MAAMSETIPDTVPDDALALQRLWHWEKTAPGRIAFTQPGGGTLRDISWAEAVGQARRMAA
HLVSLGLPHGSCIAILGKNSAHWLMADWAIWMAGHVSVPLYPTLAAATVRQVLEHSGARL
LFVGKLDTWHEMKAGVPEGLPCVELPLGPASGAPRWDDIVAANSPLAGEPVRPGDELCTV
MYTSGTTGAPKGVMHRFSHFAWALQSGLRRIGGLDADARMLSYLPLSHVAERTLVEHGQL
ASGMRVYFADTLETFAEDLRRARPTVFFSVPRLWLKFQQGVHAKMPPSKLNTMLAVPGLG
RIVRRKVLEGLGLDACRFAAGGAAPMPPDLLRWYARLGLDVVEVYGMTENCGISHATLPG
HPRPGTVGLPYDGVQSRLDPQSGEIQMRCPALMTGYYREPELTREAFTADGWLHTGDQGE
LDDGGNLRITGRVKDLFKTSKGKYVAPAPIEDKLVMHPAVEACCVSGAHLHQPLGLVMLN
PAAAAQADDAEGRAALERSLADHLATVNSLLDPHERLVCLVAMRDAWTVANDLVTPTFKV
KRGRIEALFARRYEDWTAGGRPVVWYDGA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtggccgccatgtccgagacgatccccgacaccgtgcccgacgatgcgctcgcgctgcag
cgcctgtggcactgggagaagaccgcgcccgggcgcatcgccttcacccagcccggcggc
ggcacgctgcgcgacatctcctgggccgaggctgtcggccaggcgcggcgcatggcggcg
cacctcgtctcgctcggcctgccgcatggctcgtgcatcgccatcctcggcaagaacagc
gcgcactggctgatggccgactgggcgatctggatggccggccacgtctcggtgccgctg
tacccgacgctggccgcggccaccgtgcgccaggtgctggaacacagcggcgcgcgcctg
ctcttcgtcggcaagctggacacgtggcacgagatgaaggccggcgtgcccgagggcctg
ccctgcgtcgagctgccgctgggcccggccagcggcgcgccgcgctgggacgacatcgtc
gccgccaactcgccgctggccggcgagccggtgcgccccggcgacgagctctgcaccgtg
atgtacacctcgggcacgaccggcgcgcccaagggcgtgatgcaccgcttctcgcacttc
gcctgggcgctgcagtcggggctgcggcgcatcggcgggctggatgccgacgcgcgcatg
ctgagctacctgccgctgtcgcacgtcgccgagcgcacgctggtcgaacacgggcagctc
gccagcggcatgcgcgtctatttcgccgacacgctggagaccttcgccgaggacctgcgc
cgcgcgcggccgacggttttcttctcggtgccgcggctgtggctcaagttccagcagggc
gttcacgcgaagatgccgccgtccaagctgaacacgatgctcgccgtgcccggcctgggc
cgcatcgtgcggcgcaaggtgctggaaggcctggggctggacgcctgccgcttcgccgcc
ggcggtgccgcgccgatgccgcccgacctgctgcgctggtacgcgcgcctggggctggac
gtcgtcgaggtctacggcatgaccgagaactgcggcatcagccacgccacgctgcccggc
cacccacgccccggcaccgtgggcctgccctacgacggcgtgcagtcgcggctggatccg
caaagcggcgagatccagatgcgctgcccggcgctgatgaccggctactaccgtgagccc
gagctgacgcgcgaagccttcaccgccgacggctggctgcacaccggcgaccagggcgag
ctcgacgacggcggcaacctgcgcatcaccggccgcgtgaaggacctgttcaagaccagc
aagggcaagtacgtcgcgccggcgccgatcgaggacaagctggtgatgcacccggcggtc
gaagcctgctgcgtcagcggcgcccacctgcaccagccgctgggcctggtgatgttgaac
ccggccgccgcggcgcaggccgacgacgccgaaggccgcgcggcgctggagcgttcgctg
gccgaccatctggcgacggtgaactcgctgctcgacccgcacgagcgcctggtctgcctg
gtcgcgatgcgtgacgcctggacggtggccaacgacctcgtcacgccgaccttcaaggtc
aagcgcggccgcatcgaggcgctgttcgcgcgccgctacgaagactggaccgccggcggc
cggccggtcgtctggtacgacggcgcctga
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