Rubrivivax benzoatilyticus: RBXJA2T_09037
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Entry
RBXJA2T_09037 CDS
T04092
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn00061
Fatty acid biosynthesis
rbn00071
Fatty acid degradation
rbn01100
Metabolic pathways
rbn01212
Fatty acid metabolism
rbn02024
Quorum sensing
rbn04146
Peroxisome
Module
rbn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RBXJA2T_09037
00071 Fatty acid degradation
RBXJA2T_09037
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RBXJA2T_09037
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBXJA2T_09037
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rbn01004
]
RBXJA2T_09037
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbn04147
]
RBXJA2T_09037
Enzymes [BR:
rbn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RBXJA2T_09037
Lipid biosynthesis proteins [BR:
rbn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RBXJA2T_09037
Exosome [BR:
rbn04147
]
Exosomal proteins
Exosomal proteins of breast milk
RBXJA2T_09037
Exosomal proteins of breast cancer cells
RBXJA2T_09037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
EGJ10459
LinkDB
All DBs
AA seq
557 aa
AA seq
DB search
MFKPWLAHYPDGIPPEIDVGCHASLVDALADACTRFADQPALWSMGRTMSYRQLDEASLA
FAAWLQHGAGLVRGERVALMMPNLMQYPVALLGVLRAGLVVVNVNPLYTPRELEHQLQDS
GAAAIVVLENFASKLEQVVAATRLRAIVTTGAGDLLGFKGHVVNAVVRHVKKMVPPWRLP
GAVGFNQALAAGRRRALSPVTLGHDDLAFLQYTGGTTGVAKGAMLTHGNVLANVLQVTAW
LARDMQDGRETVVLPLPMYHVFALMASFVFLRKGSKLVLIPNPRDMGEMLKTLQTVPFTG
IVGVNTLYRALLDAPGFARVDLGGLKLAVAGGMAVQHVVAQRWRERARVPLVEGYGLTEA
SPVAIANPVDVHEWSGTIGMPIPSTDVVIADDEGRALPPGSVGEIRLRGPQIMRGYWQRP
EETAEVLTADGWLRTGDMGTMDEQGNIRITDRKKDMIVVSGFKVFPNEVEDVLTMHPGVQ
EAGAVGVPDERSGEAVKVFVVRHDPELTERELLAHCRQHLTGYKMPRQIEFREQPLPRTN
IGKILRRELRDGPPPAP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagccctggctcgcccactatccggacggcattccgccggaaatcgacgtcggc
tgccacgcgtcgctggtcgacgcgctcgccgacgcctgcacccgcttcgccgatcagccc
gccttgtggtcgatgggccgcacgatgagctaccgccagctcgacgaggcgagcctcgcc
ttcgccgcctggctgcagcacggcgccggcctggtgcgcggcgaacgtgtcgcgctgatg
atgcccaacctcatgcagtacccggtggcgctgctgggcgtgctgcgcgcggggctggtc
gtcgtcaacgtcaacccgctgtacacgccgcgcgagctggagcaccagctgcaggattcg
ggcgccgcggccatcgtggtgctggagaacttcgcgtccaagctggagcaggtggtcgcg
gcgacgcggctgcgcgccatcgtcaccaccggcgccggcgacctgctcggcttcaagggc
cacgtcgtcaacgccgtcgtgcgccacgtgaagaagatggtgccgccgtggcggctgccg
ggtgccgtcggcttcaaccaggcgctggccgccgggcgccgccgcgcgctgtcgccggtc
acgctgggccacgacgacctggccttcctgcagtacaccggcggcaccaccggcgtcgcc
aagggcgcgatgctgacccacggcaacgtgctggccaacgtgctgcaggtgacggcctgg
ctggcgcgcgacatgcaggacggccgcgagacagtcgtgctgccgctgccgatgtaccac
gtgttcgcgctgatggcgtccttcgtcttcctgcgcaagggctccaagctggtgctgatc
ccgaacccgcgcgacatgggcgagatgctgaagacgctgcagacggtgccgttcaccggc
atcgtcggcgtcaacacgctgtaccgcgcgctgctcgacgcaccgggtttcgcccgggtc
gacctcggcgggctgaagctcgcggtggccggcggcatggcggtgcagcacgtcgtcgcc
cagcgctggcgcgaacgcgcccgggtgccgctggtcgagggttacggcctgaccgaggcc
tcgccggtggcgatcgccaacccggtcgacgtgcacgagtggagcggcacgatcggcatg
ccgatcccgagcaccgatgtcgtcatcgccgacgacgagggccgcgcgctgccgcccggg
agcgtcggcgagatccgcctgcgcggcccgcagatcatgcgcggctactggcagcggccc
gaggagaccgccgaggtgctgaccgccgacggctggctgcgcaccggcgacatgggcacg
atggacgagcagggcaacatccgcatcaccgaccgcaagaaggacatgatcgtcgtctcg
ggcttcaaggtcttcccgaacgaggtcgaggacgtgctgacgatgcaccccggggtgcag
gaagccggcgcggtgggcgtgcccgacgaacgttcgggcgaggcggtcaaggtcttcgtc
gtgcgccacgaccccgagctgaccgagcgcgagctgctggcgcactgccgccagcacctc
accggctacaagatgccgcgccagatcgagttccgcgagcagccgctgccgcgcaccaac
atcggcaagatcctgcgccgcgaactgcgcgacgggccgccgccggcgccctga
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