Rubrivivax benzoatilyticus: RBXJA2T_11638
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Entry
RBXJA2T_11638 CDS
T04092
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBXJA2T_11638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbn03019
]
RBXJA2T_11638
Messenger RNA biogenesis [BR:
rbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RBXJA2T_11638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
EGJ10975
LinkDB
All DBs
AA seq
188 aa
AA seq
DB search
MLDREGFRPNVGIVLLNAKNQVFWGKRLRTHSWQFPQGGIKHGESPEQAMFRELHEEVGL
KPEHVQIMGRTRDWLRYEVPEHYIRRDARGHYRGQKQIWFLLRLVGRDSDMNLRATDHPE
FDAWRWNDYWVPLDVVIEFKRGVYEMALTELARYLPRQNTHNRYLRAGLRTHRDDEAPRA
APEPAAPR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccgggagggcttccggcccaacgtcggcatcgtgctgctgaatgcgaaaaac
caggttttctggggcaagcgcttgcgcacccactcctggcagtttccgcagggcggcatc
aagcacggggagtcgcccgagcaggcgatgttccgtgagttgcatgaagaggtgggcctc
aagcccgagcacgtgcagatcatgggtcgcacgcgcgactggctgcgctacgaggtgccc
gagcactacatccgccgcgacgcgcgcggccactaccgcggccagaagcagatctggttc
ctgctgcgcctggtcgggcgcgacagcgacatgaacctgcgcgccaccgaccatccggag
ttcgacgcctggcgctggaacgactactgggtgccgctggacgtcgtcatcgagttcaag
cgcggcgtctacgagatggcgttgaccgagctcgcgcgctacctgccgcgccagaacacg
cacaaccgctacctgcgcgccgggctgcgcacgcaccgcgacgacgaggcgccgcgcgcg
gcgccggagccggccgccccgcgctga
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