Rubrivivax benzoatilyticus: RBXJA2T_12472
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Entry
RBXJA2T_12472 CDS
T04092
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RBXJA2T_12472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbn03400
]
RBXJA2T_12472
DNA repair and recombination proteins [BR:
rbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RBXJA2T_12472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_14
Motif
Other DBs
NCBI-ProteinID:
EGJ11141
LinkDB
All DBs
AA seq
844 aa
AA seq
DB search
MMVQYLRIKAEFPDTLVFYRMGDFYELFYDDARKANRLLDITLTTRGQSAGEPVVMAGVP
VHSVDAYLARLLKLGEAVAIAEQVGEVGAAKGPVERKVVRVVTPGTVTDSELLAERADTL
LLAVHRQRNTWGLAWLGLASGELGLTECSERELAGWLARLQPAELLHDGSGELPAALAQA
PCARTARPAWQFESALGERKLREQLQVATLAGFGAQELKVAHAAAAALLSFAEHTQGRAL
AHLRSVAVPRSSELIELPPATHRNLELVQTLRGEDSPTLLSLLDTCRTGMGSRRLRHWLT
HPQRDRSEARARHEAIACLLDQGYEPLRDALRGVSDVERITARIALRQVRPRELSGLRAT
LLGLPALRTAVPAGAPLLAEFDAALAPDDGIANVLSAIAEEPAVMLRDGGVIAAGVDAEL
DELRAISQNCDAFLLDLESRERARTGIGNLRVQFNKVHGFYIEVTSSGRDKVPADYQRRQ
TLKNAERYITPELKAFEDKALSAQERALAREKWIYEQVLDALQPLLPPLTALARALASLD
ALATLAERAAALGWCRPEFVPYPCIEIEAGRHPVVEARLRETGAGPFIANHCRLDAKTRL
LVITGPNMGGKSTFMRQVALIVLLAAMGSYVPASACRLGPVDAIHTRIGAADDLANAQST
FMLEMTEAAAIVHTATEHSLVLMDEIGRGTSTFDGLALAAAIATQLHDRNRSFTLFATHY
FELTEFPAEHERALNLHVGAVESGHDIVFLHQIEPGPASRSYGVQVARLAGMPATVIRQA
RATLEALEAKAQAGHAQVDLFAPPPAAAAPEPSAVEAALAAIDPDRLAPREALDALYRLK
ALLG
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccagtatctacggatcaaagcggagtttccggacacgctcgtcttctaccgg
atgggcgatttctacgagctcttctacgacgacgcgcgcaaggccaaccggctgctggac
atcacgctgacgacgcgcggccagagcgccggcgagccggtggtgatggccggcgtgccg
gtgcattcggtcgacgcctacctcgcgcggctgctgaagctgggcgaggcggtggcgatc
gccgagcaggtcggcgaggtcggtgccgccaagggcccggtcgaacgcaaggtggtgcgt
gtcgtcacgccgggcacggtgaccgacagcgagctgctggccgaacgcgccgacacgctg
ctgctggccgtgcaccgccagcgcaacacctggggcctggcctggctgggcctggccagc
ggcgagctcgggctcaccgaatgcagcgagcgtgaactcgccggctggctggcgcggctg
cagccggccgagctgctgcacgacggcagcggcgagctgccggcagcactcgcccaggcg
ccttgcgcgcgcacggcgcgcccggcctggcagttcgagtcggctttgggcgaacgcaag
ctgcgcgagcagcttcaggtggcgacgctggccggcttcggcgcccaggagctgaaggtc
gcgcacgccgccgccgcggcgctgctgagttttgccgaacacacccagggccgcgcgctg
gcgcatctgcgcagcgtcgccgtgccgcgttccagcgagctgatcgagctgccgccggct
acgcaccgcaacctcgagctggtgcagacgctgcgtggcgaggacagcccgacgctgctg
tcgctgctggacacctgccgcaccggcatgggcagccgccggctgcgccactggctgacg
cacccgcaacgcgaccgcagcgaggcgcgcgcgcgccacgaagccatcgcctgcctgctg
gaccagggctacgagccgctgcgcgacgcgctgcgcggcgtcagcgacgtcgagcgcatc
accgcgcgcatcgcgctgcgccaggtgcgcccgcgcgaactgtcggggctgcgtgcgacg
ctgctgggcctgccggcgctgcgcaccgcggtgccggccggcgcgccgctgctggccgag
ttcgacgccgcgctggcgcccgacgacggcatcgccaacgtgctgtcggcgatcgccgag
gagccggcagtgatgctgcgcgacggcggcgtcatcgccgccggcgtcgacgccgagctc
gacgagctgcgcgcgatcagccagaactgcgacgccttcctgctcgacctggagtcgcgc
gaacgtgcgcgcaccggtatcggcaacctgcgtgtgcagttcaacaaggtgcacggtttc
tacatcgaggtcaccagctccggccgcgacaaggtgccggccgactaccagcgccgccag
acgctgaagaacgccgagcgctacatcacgcccgagctgaaagccttcgaggacaaggcg
ctgtcggcgcaggagcgtgcgctggcgcgcgagaagtggatctacgagcaggtgctcgac
gcgctgcagccgctgctgccgccgctgaccgcgctggcgcgggcgctggcttcgctggac
gcgctggcaacgctggccgaacgcgccgcggcgctgggctggtgccgcccagagttcgtg
ccctacccctgcatcgagatcgaggccggccgccacccggtcgtcgaggcgcggctgcgc
gagaccggcgccgggcccttcatcgccaaccactgccggctcgacgcgaagaccaggctg
ctcgtcatcaccggccccaacatgggcggcaagagcaccttcatgcgccaggtggcgctg
atcgtgctgctggcggcgatgggctcgtacgtgccggccagcgcctgccgtctggggccg
gtcgacgcgatccacacccgcatcggcgcggccgacgacctggccaacgcgcagtcgacc
ttcatgctcgagatgaccgaggccgcggccatcgtgcacaccgccaccgagcacagcctg
gtgctgatggacgagatcggccgcggcaccagcaccttcgacggcctggcgctggccgcg
gccatcgcgacccagctgcacgaccgcaaccgcagcttcacgctgttcgcgacgcactac
ttcgagctcaccgagttcccggccgagcacgaacgcgcgctgaacctgcacgtcggcgcc
gtcgagagcggccacgacatcgtcttcctgcaccagatcgaacccggcccggcgagccgc
agctacggcgtgcaggtcgcgcgcctggccggcatgccggcgacggtgatccgccaggca
cgggcgacgctggaggcgctggaagccaaggcccaggccggccacgcgcaggtcgacctg
ttcgcgccgccgccggccgcggcagcgcccgagccttcggcggtggaagcggcgctggcc
gcgatcgaccccgaccgcctggcgccgcgcgaggcgctggacgcgctgtaccggctgaag
gcgctgctcggctga
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