Rubrivivax benzoatilyticus: RBXJA2T_12587
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Entry
RBXJA2T_12587 CDS
T04092
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBXJA2T_12587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbn03400
]
RBXJA2T_12587
DNA repair and recombination proteins [BR:
rbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBXJA2T_12587
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBXJA2T_12587
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
Motif
Other DBs
NCBI-ProteinID:
EGJ11164
LinkDB
All DBs
AA seq
703 aa
AA seq
DB search
MTEATDVATEPARGEFVTFADSPFQLFQPYPPAGDQPTAINQLVEGVHDGLSYQTLLGVT
GSGKTFTMANVIARLGRPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSAINEHIEQMRLSATKSILERRDVVIVATVSAIYGIGKPEDYTQMRLIV
RVGDKMGQRDVIARLVAMQYTRNEIDFGRGSFRVRGDTIDVFPAEHSELALRIELFDDEI
ESLALLDPLTGRVRQKVPRFVIYPSSHYVTPREQVLRAVDGIKAELRERVDFFVKNGKLV
EAQRVEQRTRFDVEMLQEVGHCKGIENYTRHLSGAAPGEPPSTLVDYLPRDAIMFLDESH
VLIGQFGGMYNGDRARKTTLVEYGFRLPSALDNRPLRFEEFERRMRQAVFVTATPADYEK
THSGQVVEQVVRPTGLVDPEVEVRPASTQVDDVLQEIRERVDVNERVLITTLTKRMAEQL
TDYLSDNGVKVRYLHSDIDTVERVEILRDLRLGLFDVLVGINLLREGLDLPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNARGKAILYADKITDSMRRAIDETERRRAKQIAHNEAM
GIVPRTVNKRIRDLIDGVVSDKTAKDELQSAQAAAEVEAMSEKDLGKRIKALEKQMLEHA
RNLEFEKAARVRDQLALLREQAFGADGHDVNVVPLDAARGGAR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagccaccgacgtcgcgacggagcccgcccggggcgagttcgtcacgtttgcc
gattccccgttccagctcttccagccgtatccgccggccggtgaccagccgaccgcgatc
aaccagctcgtcgaaggcgtgcacgacggcctgagctaccagacgctgctgggcgtcacc
ggctcgggcaagaccttcacgatggccaacgtcatcgcccggctgggccggccggcgatc
gtcttcgcgccgaacaagacgctggccgcgcagctgtacagcgagttccgcgagttcttc
ccgaagaacgccgtcgagtacttcgtcagctactacgactattaccagcccgaggcctac
gtgccgcagcgcgacctgttcatcgagaaggacagcgcgatcaacgagcacatcgagcag
atgcggctgtcggcgacgaagagcatcctcgagcgccgcgacgtcgtcatcgtcgccacc
gtcagcgcgatctacggcatcggcaagcccgaggactacacgcagatgcggctcatcgtg
cgtgtcggcgacaagatgggccagcgcgacgtcatcgcccggctggtggccatgcagtac
acgcgcaacgagatcgacttcggccgcggcagcttccgcgtgcgcggcgacacgatcgac
gtcttcccggccgaacacagcgagttggcgctgcgcatcgagctcttcgacgacgagatc
gagtcgctggcgctgctggacccgctgaccggccgcgtgcgccagaaggtgccgcgtttc
gtcatctacccgtccagtcactatgtgacgccgcgcgagcaggtgctgcgcgccgtcgac
ggcatcaaggccgagctgcgcgagcgtgtcgacttcttcgtcaagaacggcaagctcgtc
gaggcccagcgtgtcgagcagcgcacgcgcttcgacgtcgagatgctgcaggaggtcggc
cactgcaagggcatcgagaactacacccgccacctgtcgggcgccgcaccgggcgagccg
ccgtcgacgctggtcgactacctgccgcgcgacgcgatcatgttcctcgacgagagccac
gtgctgatcggccagttcggcggcatgtacaacggcgaccgcgcgcgcaagacgacgctg
gtcgagtacggcttccgcctgcccagcgcgctggacaaccgcccgctgcgtttcgaggag
ttcgagcgccgcatgcgccaggcggtgttcgtcaccgcgacgccggccgactacgagaag
acgcattccggccaggtcgtcgagcaggtcgtgcgtccgaccggcctcgtcgaccccgag
gtcgaggtgcgtccggcctcgacccaggtcgacgacgtgctgcaggagatccgcgagcgg
gtcgacgtcaacgagcgtgtgctgatcacgacgctgaccaagcgcatggccgagcagctg
accgactacctgtcggacaacggcgtcaaggtgcgctacctgcacagcgacatcgacacc
gtcgagcgcgtggagatcctgcgcgacctgcgcctgggcctgttcgacgtgctcgtcggc
atcaacctgctgcgcgaaggcctggacctgcccgaggtgagcctggtggcgatcctcgac
gccgacaaggaaggttttttgcgtgccgagcgcagcctgatccagaccatcggccgcgcg
gcgcgcaacgcgcgcggcaaggccatcctctacgccgacaagatcaccgactcgatgcgc
cgcgcgatcgacgagaccgagcgtcggcgcgccaagcagatcgcgcacaacgaggcgatg
ggcatcgtgccgcgcacggtcaacaagaggatccgcgacctgatcgacggcgtcgtcagc
gacaagaccgccaaggacgagttgcagtcggcgcaggcggccgccgaggtcgaggcgatg
tccgagaaggacctgggcaagcgcatcaaggcgctggagaagcagatgctcgaacacgcg
cgcaacctcgagttcgagaaggcggcgcgggtgcgcgaccagctcgcgctgctgcgcgag
caggccttcggcgccgacggccacgatgtcaacgtggttccgcttgacgccgcgcgcgga
ggcgctcgatga
DBGET
integrated database retrieval system
