Rubrivivax benzoatilyticus: RBXJA2T_14101
Help
Entry
RBXJA2T_14101 CDS
T04092
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBXJA2T_14101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbn03400
]
RBXJA2T_14101
Enzymes [BR:
rbn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RBXJA2T_14101
DNA repair and recombination proteins [BR:
rbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RBXJA2T_14101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
EGJ11466
LinkDB
All DBs
AA seq
1111 aa
AA seq
DB search
MLSLHFSNRFEALATLLGAHLAAPREDLFVADEIVVPSAAVRRRLTLEFAQVEGVCAHLR
FDYLAQWLWRQIAGVVPGIDAERSPFAPEVLAWRVWRALGDREGVAAHPRLAGYLVQADE
VMRWELAERIAATIEQYVTYRPEWLAEWLAGRPVVFPGGAAPADAGWQAELWRRIVAETG
VSGRHPIEGFIDTLSRPGGAERAREAGLPERVHVVALPTMPPLHARLLAALGRAIDVEVY
LLNPCREYWFELVDPRRLAWLQAAGRDAGHEVGNRLLAGWGKQTQAQIDGLLDAAGDAVV
DEHLFIQPPEHTLLGRLQTAILDSVELDAGSAADLTGERSVEFHVAHSRTRELEALHDRL
LALFAADATLTPGDVLVVTPDLEATAPLVDAVFGTVPAGRRIPYAVTGRARSGQDPAARA
LLALLSLTSSRVAASELFALLQQPAVARRFGLDEAALERLHGWLLASGLHWGLDAAHRAG
FDLPAETRHTLADALDRLFLGHALPAGAESPLPGLLPAGDAEGSAAATLGAFWRYAEALR
WLQAESVRPRPAAAWARLLHAALDRFVAPAGDEQPALRELRATIARLADDVASGAGAATV
LPLAVLRRALEARLDDPARGGVPSGAVTFSAMSSLRGLPYRVVCAIGLDDGAFPTTARPP
EFDLIALAPRRGDRQRRHDERNVFLDLLLAAREHLHLSWRGRSVRDNAPLPPSVLVAELL
ELLAAATADNPDEPASVAAARKRLVVEHPLQSFAPELFDAGADARRRSHDAELAAALRAG
AVAAALPPVAASAEDDEEEEELQAASDPALPFFTTPLPPPGPEWRTPTLQQLVEFFRQPT
RYWLRRRLQIALQFDEAALDDDEPLVADALARRAFADRLLPPLLAGVDAETAWRRAEAGT
ELPSGAIGQQQMQAEFARVAAFADRVRDALAEPVLDAQGAELDFELDGERWTVAAGFADL
RASGLVRWRWGVLRGADLLEAWLQHLVLAAAAPAGVAARTRWLLTNGELVLRAPEAPREH
LATLLRLYRRGLAEPLRLYPKTSLALVRDGAAAALKCWTPGERTPFAEGGDESIRLAWRG
REAEALAGDFEPVAQAVFGPLLAHAEGSALQ
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgctgcacttctccaaccgtttcgaagccctggccacgctgctgggcgcacac
ctggccgcgccgcgcgaggacttgttcgtcgccgacgagatcgtcgtgcccagcgccgcc
gtgcgccgccggctgacgctggagttcgcccaggtcgaaggcgtctgcgcccacctgcgt
ttcgactacctggcgcaatggctgtggcgccagatcgccggcgtcgtgcccggcatcgac
gccgaacgttcgccgttcgcgcccgaggtgctggcctggcgggtctggcgcgcgctcggc
gaccgcgagggggtggccgcccacccgcggctcgcgggctacctggtgcaggccgacgag
gtgatgcgctgggagctggccgaacgcatcgccgccaccatcgagcagtacgtcacctac
cgccccgaatggctggccgagtggctggccgggcggccggtggtcttccccggcggcgcg
gcgccggccgacgccggctggcaggccgaactgtggcggcgcatcgtcgccgagaccggc
gtctcgggccggcacccgatcgaaggtttcatcgacacgctgtcgcggcccggcggcgcc
gagcgcgcccgcgaagccgggctgcccgaacgagtgcacgtcgtcgcgctgccgacgatg
ccgccgctgcacgcgcgcctgctggcggcgctggggcgcgcgatcgacgtcgaggtctac
ctgctcaacccctgccgcgaatactggttcgagctcgtcgacccacgccgcctggcctgg
ctgcaggccgccgggcgcgacgccggccacgaggtcggcaaccggctgctggccggctgg
ggcaaacagacccaggcgcagatcgacggcctgctcgacgccgccggcgacgccgtcgtc
gacgagcacctgttcatccagccgcccgagcacacgctgctcggccggctgcagacggcg
atcctcgactcggtcgaactcgacgcgggctcggcggccgacctgaccggcgaacgcagc
gtcgagttccacgtcgcgcattcgcgcacccgcgaactggaagcgctgcacgaccggctg
ctggccttgttcgccgccgacgcgacgctgacgcccggcgacgtgctcgtcgtcacgccc
gacctggaagccaccgcgccgctggtcgacgccgtcttcggcaccgtgccggccgggcgc
cgcatcccttacgccgtcaccggccgcgcacgcagcggccaggacccggcggcgcgggca
ctgctggcgctgctgtcgctcaccagttcgcgcgtcgccgccagcgagctgttcgcgctg
ctgcagcagccggcggtcgcgcggcgtttcggcctcgacgaagcggcgctggagcgcctg
cacggctggctgctcgccagcggcctgcactggggcctggacgccgcgcaccgcgccggc
ttcgacctgccggccgaaacacgccacacgctggccgatgcgctggaccggctgttcctc
ggccacgccttgccggccggcgccgagtcgccgctgcccgggctgctgccggccggcgac
gccgaaggttcggccgcggcgacgctgggtgccttctggcgttatgccgaggcgctgcgc
tggctgcaggccgaaagcgtgcgcccgcgcccggccgccgcctgggcgcggctgctgcac
gcggcgctcgaccgtttcgtcgccccggccggcgacgaacagccggcgctgcgcgaactg
cgcgcgacgatcgcccgcctggccgacgacgtcgcctccggcgccggcgccgcgacggtg
ctgccgctggcggtgctgcgccgagcgctcgaagcccggctggacgacccggcgcgtggc
ggcgtgccctcgggcgcggtcacgttctcggcgatgagcagcctgcgcggcctgccctac
cgcgtcgtctgcgccatcggcctggacgacggcgccttcccgacgaccgcccgcccgccc
gagttcgacctgatcgcgctggcgccgcggcgcggcgaccgccagcgccgccacgacgag
cgcaacgtcttcctcgacctgctgctggccgcgcgcgagcacctgcacctgagctggcgc
ggccgcagcgtgcgcgacaacgcgccgctgccgccgtcggtgctggtcgccgaactgctg
gagctgctggccgcggccaccgcagacaaccccgacgagccggcctcggtggcggcggca
cgcaagcgcctggtcgtcgaacacccgctgcagtctttcgcgcccgaactcttcgacgcc
ggggccgacgcccgtcgccgcagccacgacgccgaactcgccgccgcgctgcgcgccggt
gccgtggccgcggccttgccaccggtggccgcaagcgccgaggacgacgaagaggaagaa
gagctgcaagccgcgtccgaccccgccctgcccttcttcaccacgccgctgccgccgccc
ggccccgagtggcgcacgccgacgctgcagcagctcgtcgagttcttccgccagccgacg
cgttattggctgcgccgccggctgcagatcgcgctgcagttcgacgaagccgcgctggac
gacgacgaaccgctggtcgccgacgcgctggcgcgccgcgctttcgccgatcgcctgctg
ccgccgctgttggccggcgtcgacgccgagaccgcgtggcggcgcgccgaagccggcacc
gaactgccgtcgggcgccatcggccagcagcagatgcaggccgagttcgcgcgtgtcgcc
gcgttcgccgaccgggtgcgcgacgcgctggccgagccggtgctcgacgcccaaggcgcc
gaactcgacttcgagctcgacggcgaacgctggaccgtcgccgccggcttcgccgacctg
cgcgccagtggcctggtgcgctggcgctggggcgtgctgcgtggcgccgacctgctcgaa
gcctggctgcagcacctggtgctggccgccgcggcgccggccggcgtcgcggcgcgcacc
cgctggctgctgacgaatggcgaactcgtgctgcgcgcgcccgaggcgccgcgtgaacat
ctcgccacgctgctgcgcctgtaccgccgcggtctggccgagccgctgcggctgtacccg
aagacctcgctggcgctggtgcgcgacggcgccgccgcggcgctgaagtgctggacaccg
ggcgaacgcacgccgttcgccgaaggtggcgacgaatcgatccgcctggcctggcgcggc
cgcgaagccgaggcgctggcgggcgacttcgagccggtcgcgcaagccgtcttcggcccg
ctgctggcccacgccgaagggagcgcgctgcaatga
DBGET
integrated database retrieval system
