Rubrivivax benzoatilyticus: RBXJA2T_14111
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Entry
RBXJA2T_14111 CDS
T04092
Name
(GenBank) DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBXJA2T_14111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbn03400
]
RBXJA2T_14111
Enzymes [BR:
rbn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RBXJA2T_14111
DNA repair and recombination proteins [BR:
rbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RBXJA2T_14111
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
RecD_N
UvrD-helicase
NAT10_TcmA_helicase
SH3_13
AAA_22
SLFN-g3_helicase
AAA_16
nSTAND3
DEAD
MukB
AAA_28
T2SSE
Apolipoprotein
Terminase_6N
CbiA
PhoH
AAA_29
Motif
Other DBs
NCBI-ProteinID:
EGJ11468
LinkDB
All DBs
AA seq
667 aa
AA seq
DB search
MSRRRTPDEATLPLFDDEPAPPPVVAPTPEPAADAGWTDDLPDLDVFFEEDGGVLDAETE
PETTEAVEETPTRPETPAEALAAGLAAHVEAWSRRLGADADDARAASRAAEALSRATAAG
HVCLMLDELDGEPADWRARLEASRVVGPAHAPGAAPLVLDADGRLYLQRDFDHERRLAAR
LKAAARPVPGALDAGARARLAELFTANTSTEEAPDWQRAAAALALRQRLAVISGGPGTGK
TTTVVALLACLLADDPEARIALAAPTGKAAARMTEAIRGRAAQLPEAIRARLPQEASTVH
RLLRAGPDGFFHGAERPLAIDALVVDEASMLDLALARRLLDAVPTHARIVLLGDKDQLAA
VESGAVFAELSADTTLTPGCRAELAAACGVTPQALQPPPAAAPALADSVVWFRRTFRFAA
DSGIGRLAGLVNGGRADEALAWLGAGGDASVQWLDDRGAEPGTAVRDAIAAGFAPYVEAL
RRDPQDAAAAMHAFESFRVLCATREGARGVAGVNALAAAQLRRALGAAPGTWYAGRPVMV
RRNDYVLRLFNGDIGLALPDAEGRLDVVFPAPGGGWRRVAPARLPPHDTAFGMTVHQSQG
SEFTDLLLLTPDRPLRAMTRELLYTGITRARQRVTLAGPAAALAAAVRSPTRRRSGLAAR
LHELETR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgccgcacgcccgacgaggccacgctgccgctgttcgacgacgaaccggcg
ccgccgccggtcgtggcgccgacgcccgagccggcggccgacgccggctggaccgacgat
ctgcctgacctcgacgtcttcttcgaggaagacggcggcgtgcttgacgccgaaaccgag
cctgaaaccaccgaggcggtcgaagagacaccaacccgtcccgagacacccgccgaagcg
ctggccgccggtctggcggcacacgtcgaagcctggtcgcgccgcctcggcgccgacgcc
gacgacgcccgcgccgccagccgcgccgccgaggcgctgtcgcgcgccaccgccgccggc
cacgtctgcctgatgctcgacgaactcgacggcgagcccgccgactggcgtgcccggctc
gaagcctcgcgggtcgtcggcccggcgcacgcgcccggcgccgcgccgctggtgctcgac
gccgacggccggctgtacctgcagcgcgacttcgaccacgagcgccgcctggccgcacgg
ctgaaggccgcagcgcggccggtgcccggcgcgctggacgccggcgcgcgcgcgcggctg
gccgaactcttcaccgccaacaccagcacggaggaggcgcccgactggcagcgggccgcc
gccgcgctggcgctgcgccagcgcctggccgtcatcagcggcggcccgggcaccggcaag
acgacgaccgtcgtcgcgctgctggcctgcctgctggccgacgaccccgaggcgcgcatc
gcgctggccgcgcccaccggcaaggccgcggcacgcatgaccgaggcgatccgcggccgt
gccgcgcagttgccggaagcgatccgcgcacgcctgccgcaggaagccagcaccgtgcac
cggctgctgcgcgccgggcccgacggctttttccacggcgccgagcggccgctggcgatc
gacgcgctggtcgtcgatgaagcctcgatgctggacctggcgctggcgcgccggctgctc
gacgcggtgccgacgcacgcgcgcatcgtgctgctcggcgacaaggaccagctcgccgcg
gtcgagagcggcgccgtcttcgccgaactgagcgccgacacgacgctgacgcccggctgc
cgcgccgaactcgccgccgcctgcggcgtcacgccccaggcgctgcagccgccgccagcc
gccgcgccggcgctggccgacagcgtggtctggttccgccgcaccttccgtttcgccgcc
gattcgggcatcggccggctggccggcctggtcaacggcggccgcgccgacgaggcgctg
gcctggctgggcgctggcggtgacgcttcggtgcagtggctggacgaccgcggtgccgaa
cccggcaccgcggtgcgcgacgcgatcgccgccggcttcgcgccctacgtcgaggcgctg
cgccgcgacccgcaggacgctgccgcggcgatgcacgccttcgagtcgttccgcgtgctc
tgcgcgacacgcgagggcgcgcgcggcgtcgccggcgtcaatgcgctggccgcggcccag
ctgcgccgtgcgctcggcgccgcgcccggcacctggtacgccggccggccggtgatggtg
cgccgcaacgactacgtgctgcgcctgttcaacggcgacatcggcctggcgctgcccgac
gccgagggccggctcgacgtcgtcttcccggcgcccggcggcggctggcgccgcgtcgcg
ccggcacgcctgccgccgcacgacaccgctttcggcatgacggtgcaccagtctcagggc
tcggaattcaccgacctgctgctgctgacacccgaccgcccgctgcgcgcgatgacacgc
gagctgctctacaccggcatcacacgcgcccgccagcgtgtcacgctggccggcccggcc
gcggcgctggcggccgcggtgcgttcgccgacgcggcgccgctcgggcctcgccgcccgc
ctgcacgaactcgagacccgatga
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