Rubrivivax benzoatilyticus: RBXJA2T_14726
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Entry
RBXJA2T_14726 CDS
T04092
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rbn
Rubrivivax benzoatilyticus
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rbn03009
]
RBXJA2T_14726 (rimO)
Enzymes [BR:
rbn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RBXJA2T_14726 (rimO)
Ribosome biogenesis [BR:
rbn03009
]
Prokaryotic type
ribosomal protein modification factors
RBXJA2T_14726 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
EGJ11590
LinkDB
All DBs
AA seq
462 aa
AA seq
DB search
MQETVPTVAFASLGCPKALTDSELILTQLAAEGYRTSKSFAGADLVIVNTCGFIDDAVKE
SLDTIGEALAENGRVIVTGCLGARAGDDGGNMVQQVHPKVLAVTGPHATQEVMDAVHRHV
PKPHDPFVDLVPEVRAEFRGEAGIKLTPRHYAYLKISEGCNHRCSFCIIPTMRGDLVSRP
VGEVLSEAKALFENGVKELLVVSQDTGAYGVDVQYRTGFWDGRPVKTRFADLCEQLARLA
EAHGAWVRLHYVYPYPHVDDVLPLMAEGRILPYLDVPFQHAHPDVLKRMKRPASGERNLE
RLARWRELCPELVVRSTFIAGFPGETEAEFQTLLDFVAEAQIDRAGCFAYSPVAGAPANE
LPGALPDAVREERRARFMEVAEAVSVAKLQRRVGQTMQVLVDHAPALGRKGGVGRSYADA
PEIDGSVRLLPPQKASRTLKVGEFVRARIVAAEGHDLIAMAL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaccgttccgaccgtcgccttcgcctcgctgggctgccccaaggcgctgacc
gactccgagctgatcctcacccagctcgccgccgagggctaccgcacctcgaagtccttc
gccggcgccgacctcgtcatcgtcaacacctgcggcttcatcgacgacgccgtcaaggag
agcctggacacgatcggcgaggcgctggccgagaacggccgcgtcatcgtcaccggctgc
ctgggcgcacgcgccggcgacgacggcggcaacatggtgcagcaggtgcatcccaaggtg
ctggccgtcaccggcccgcacgcgacgcaggaggtgatggacgcggtgcaccgccacgtg
cccaagccgcacgaccccttcgtcgacctggtgcccgaagtgcgcgccgagttccgcggc
gaagccggcatcaagctgacgccgcgccactatgcgtacctgaagatcagcgaaggctgc
aaccaccgctgcagcttctgcatcatcccgacgatgcgcggcgacctcgtctcgcgcccg
gtcggcgaggtgctgagcgaagcgaaggcgctgttcgagaacggcgtcaaggagctgctg
gtcgtcagccaggacaccggcgcctacggcgtcgacgtccagtaccgcaccggcttctgg
gacggccgcccggtgaagacccgcttcgcggacctctgcgagcaactggccaggctggcc
gaggcgcacggcgcctgggtgcggttgcactacgtctatccgtacccgcacgtcgacgac
gtgctgccgctgatggccgaagggcgcatcctgccgtacctggacgtgccgttccagcac
gcgcacccggatgtgctgaagcgcatgaagcgcccggccagcggcgagcgcaacctcgag
cgcctggcgcgctggcgcgagctgtgccccgagctcgtcgtgcggtcgaccttcatcgcc
ggtttccccggcgagaccgaagccgagttccagacgctgctggacttcgtcgccgaagcg
cagatcgaccgcgccggctgcttcgcctactcgccggtggcgggcgccccggccaacgag
ctgccgggcgccttgcccgacgcggtgcgcgaggaacgccgcgcgcgtttcatggaagtc
gccgaggcggtgtcggtggcgaagctgcagcgccgtgtcgggcagacgatgcaggtgctg
gtcgaccacgcgccggcgctgggccgcaagggcggtgtcggccggagctatgccgacgcg
cccgagatcgacggcagcgtgcgcctgctgccgccgcagaaggcctcgcgcacgctgaag
gtcggcgagttcgtgcgcgcgcgcatcgtcgccgccgaaggccatgacctgatcgcgatg
gcgctctga
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