Rubrivivax benzoatilyticus: RBXJA2T_17162
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Entry
RBXJA2T_17162 CDS
T04092
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn00061
Fatty acid biosynthesis
rbn00071
Fatty acid degradation
rbn01100
Metabolic pathways
rbn01212
Fatty acid metabolism
rbn02024
Quorum sensing
rbn04146
Peroxisome
Module
rbn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RBXJA2T_17162
00071 Fatty acid degradation
RBXJA2T_17162
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RBXJA2T_17162
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBXJA2T_17162
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rbn01004
]
RBXJA2T_17162
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbn04147
]
RBXJA2T_17162
Enzymes [BR:
rbn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RBXJA2T_17162
Lipid biosynthesis proteins [BR:
rbn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RBXJA2T_17162
Exosome [BR:
rbn04147
]
Exosomal proteins
Exosomal proteins of breast milk
RBXJA2T_17162
Exosomal proteins of breast cancer cells
RBXJA2T_17162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
LPD22
Motif
Other DBs
NCBI-ProteinID:
EGJ12073
LinkDB
All DBs
AA seq
648 aa
AA seq
DB search
MPTTFPRLLQEHAKRRPQAPALREKVYGIWQTLSWSELLTLVRALAGGFAAAGIARDEHV
VVVGENRPRLYASMLALQSIGAVPVPLYQDAASPEYAFPITNADVRCAVVEDQEQVDKLL
ELRETCPRLERLWYDDPRGLRKYAEPGLESLDALIEAGRAHDAAHPGAFDAAVEAGTPED
VAAMFFTSGTTGNPKGVVHTHRSLLDRASAGRDFDRLTEHEEVLAYLPPAWIGQNIFSYA
QWLACGYVVNCPESQATVTIDLKEIGPTYYFAPPRVFEALLTSVTIRMEDASAIKRWMYR
RAMAVARRVGPQLMDGKAISLGDRIAYALGQLFVYGPLRNTLGLSRVRVAYTAGEAIGPD
LFTFYRSIGINLKQLYGSTETAVFVCLQPDHEVRADTVGVPIAGVEIRVADNGEILVKSP
GLLKEYYKNPAATAEVLTADGWYHTGDAGFLDAHGHLKIIDRAKDVGRLAGGANDGAMFA
PKYVENKLKFFPFIKEAVAFGDGREKVCAFVNIDFEAVGNWAERRNLPYAGYTDLAAKPP
VLELVRECVEQVNADLAGDERLAGSQIHRFLVLHKELDADDGELTRTRKVRRGFIAEKYA
VLVDALYEGRSEQFIETAVKFEDGRSGSVSATLAILDSKVFPAQRKAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgactttcccgcgtctgttgcaggagcatgcgaagcgccgcccgcaggcccct
gcgctgcgcgagaaggtctacggcatctggcagacgctgtcgtggagcgagctgctgacg
ctggtgcgtgcgctggccggcggcttcgcggcggccggcatcgcgcgcgacgagcacgtc
gtcgtcgtcggcgagaaccggccccggctgtatgcgtcgatgctggcgctgcagtccatc
ggcgcggtgccggtgccgctgtaccaggacgcggcctcgccggagtacgcctttccgatc
accaacgccgacgtgcgctgcgccgtcgtcgaggaccaggagcaggtcgacaagctgctg
gagctgcgcgagacctgcccgcggctggagcgcctctggtacgacgacccgcgcggcctg
cgcaagtacgccgagccgggcctggagtcgctggatgcgctgatcgaggccggccgcgcg
cacgacgccgcgcaccccggcgccttcgacgccgcggtcgaggccggcacgccggaagac
gtcgcggcgatgttcttcacctcgggcacgaccggcaacccgaagggcgtggtgcacacc
caccgctcgctgctcgaccgcgcctcggccggccgcgacttcgaccgcctgaccgaacac
gaggaagtgctggcctacctgccgccggcctggatcggccagaacatcttcagctacgcc
cagtggctggcctgcggttacgtcgtcaactgccccgagtcgcaggccacggtgacgatc
gacctgaaggagatcggcccgacctactacttcgcgccgccgcgtgtcttcgaggctttg
ctgaccagcgtcacgatccgcatggaagacgcctcggcgatcaagcgctggatgtaccgc
cgcgcgatggcggtggcgcgccgtgtcggcccgcaactgatggacggcaaggcgatcagc
ctcggcgaccgcatcgcctacgcactgggccagctcttcgtctacggcccgctgcgcaac
acgctgggcttgtcgcgcgtgcgcgtggcctacaccgccggcgaggcgatcgggcccgac
ctcttcaccttctaccgctcgatcggcatcaacctgaagcagctctacggctcgaccgag
accgcggtcttcgtctgcctgcagcccgaccacgaggtgcgcgccgacacggtgggcgtg
ccgatcgccggcgtcgagatccgtgtcgccgacaacggcgagatcctcgtgaagagcccg
gggctgctgaaggagtactacaagaacccggcggccaccgccgaggtgctgaccgccgac
ggctggtaccacaccggcgacgccggcttcctcgacgcccacggccacctgaagatcatc
gaccgcgccaaggacgtcggccggctggccggcggcgccaacgacggcgcgatgttcgcg
cccaagtacgtcgagaacaagctgaagttcttccccttcatcaaggaggcggtggccttc
ggcgacggccgcgagaaggtctgcgccttcgtcaacatcgacttcgaggcggtgggcaac
tgggccgagcggcgcaacctgccctatgccggctacaccgacctggcggccaagccgccg
gtgctggagctggtgcgcgaatgcgtcgagcaggtcaacgccgacctggcgggcgacgag
cggctggccggcagccagatccaccgtttcctcgtgctgcacaaggagctcgacgccgac
gacggcgagctgacgcgcacgcgcaaggtgcggcgcggcttcatcgccgagaagtacgcg
gtgctggtcgacgcgctctacgagggccgcagcgagcagttcatcgagaccgcggtgaag
ttcgaggacggccgcagcggcagcgtctcggcgacgctggcgatcctcgacagcaaggtc
ttccccgcgcagcgaaaggcggcgtga
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