Rubrivivax benzoatilyticus: RBXJA2T_18383
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Entry
RBXJA2T_18383 CDS
T04092
Name
(GenBank) transcriptional regulator Ada/DNA-O6-methylguanine--protein-cysteine S-methyltransferase/DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBXJA2T_18383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbn03000
]
RBXJA2T_18383
03400 DNA repair and recombination proteins [BR:
rbn03400
]
RBXJA2T_18383
Enzymes [BR:
rbn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RBXJA2T_18383
Transcription factors [BR:
rbn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RBXJA2T_18383
DNA repair and recombination proteins [BR:
rbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBXJA2T_18383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
EGJ12316
LinkDB
All DBs
AA seq
479 aa
AA seq
DB search
MFPDPDAAYLALAARDARFDGRVFVGVTSTGIYCRPVCRVRTPRRENCRFFASPAQAEAA
AFRPCLKCRPEIAPGLSAMDSSDALAGCAARAIEAAVQAGEPVVLPALAARLGVGERHLR
RIFAAAHGVAPREYLATQRLLLAKQLLTDTTMPVAQVALASGFESLRRFNAAFLERYRLA
PTALRRARGETPAEPVLRLAWRPPYDVEAMLGFAARRALAGVEQVEGLAWRRTLAWPQRG
SVLDGWIEARFVPERHEVHLRAAPALAPVLGAVLRRVREALDLDADPAPIAAALAAAGLA
AEGQRLPGAFDGFETAVRIVLGQQVTVAAAGTLAARLVRRYGRPVPTPFTALTHAFPDAA
TLAAADPDELGRLGLVRQRVRALQALAAAVADGSLKLERGAPLAPTLATLAALPGFGPWT
VQLVALRVLGWPDAWPAGDAGLAAALGSRDAREHERAAEAWRPWRAYAAMALWRPGDTR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgttccccgaccccgacgccgcctacctcgcgctcgccgcccgcgacgcgcgtttcgac
ggccgcgtgttcgtcggggtcaccagcaccggcatctactgccgcccggtgtgccgcgtg
cgcacgccgcggcgcgagaactgccgcttcttcgccagcccggcgcaggccgaggccgcg
gccttccgcccctgcctgaagtgccgcccggagatcgcgcccgggctgtcggcgatggac
tcctccgacgcgctggccggctgcgccgcgcgcgcgatcgaggccgcggtgcaggccggc
gagccggtcgtgctgccggcgctggccgcacgcctgggtgtcggcgagcgccatctgcgc
cgcatcttcgccgccgcgcacggcgtcgcgccgcgggagtacctcgccacccagcgcctg
ctgctggccaagcagctcttgaccgacacgacgatgccggtggcccaggtcgcgctggcc
agcggcttcgagagcctgcggcgtttcaacgccgccttcctggaacgctaccgcctggcg
ccgacggcgctgcgccgcgcgcgcggcgagaccccggccgagccggtgctgcgcctggcc
tggcggccgccctacgacgtcgaggcgatgctcggttttgccgcgcgccgcgcgctggcc
ggggtcgagcaggtcgagggcctggcctggcggcgcacgctggcctggccgcagcgcggc
tcggtgctcgacggctggatcgaggcgcgtttcgtgcccgagcgccacgaggtccatctg
cgcgccgcgccggccttggccccggtgctgggcgccgtgctgcgccgcgtgcgcgaggcg
ctggacctggacgccgacccggcgccgatcgccgcggcactggccgccgccggcctggcg
gccgagggccagcgcctgcccggcgccttcgacggcttcgagaccgcggtgcgcatcgtg
ctcggccagcaggtcacggtggccgccgccggcacgctggcggcacgcctagtgcggcgc
tacggccgcccggtgccgacgccgttcaccgcgctgacgcacgccttccccgacgccgcg
acgctggccgccgccgaccccgacgaactcggccgcctgggcctcgtgcgccagcgtgtg
cgggcgctgcaggcgctggccgcggcggtggccgacggttcgctgaagctcgaacgcggc
gcgccgctggcgccgacgctggccacgctggccgccctgcccggcttcggcccctggacc
gtgcagctcgtcgcgctgcgtgtgctcggctggcccgatgcctggcccgccggcgacgcc
ggcctcgccgccgcgctgggcagccgcgacgcgcgtgaacacgaacgcgcggccgaggcc
tggcggccctggcgcgcctatgccgcgatggcgctctggcgccctggagacacccgatga
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