Rubrivivax benzoatilyticus: RBXJA2T_18603
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Entry
RBXJA2T_18603 CDS
T04092
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rbn
Rubrivivax benzoatilyticus
Pathway
rbn00730
Thiamine metabolism
rbn01100
Metabolic pathways
rbn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RBXJA2T_18603
Enzymes [BR:
rbn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
RBXJA2T_18603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
EGJ12360
LinkDB
All DBs
AA seq
636 aa
AA seq
DB search
MNAPGDLQQRLSLSREPFPQSRKVYVPGASPAVRVPMREITLSNGESVTLYDTSGPYTDP
AVALDVRRGLPSVRGAWLDERADTVAYDGRPPAAQDDGGRHGDAADARLDELRREAAALQ
RRPRRAAAGASVTQMHYARRGIVTPEMEYVALRENGRREWMREYLGDAAREARLRGNPRG
ACIPETITPEFVRDEVARGRAVIPANVNHPELEPMIIGRNFRVKVNANIGNSPVTSSIEE
EVEKLVWAIRWGADTVMDLSTGRHIHTTRDWIVRNSPVPVGTVPIYQALEKVGGVAEDLS
WPLLRDTLIEQAEQGVDYFTLHAGLRLPFVPLTAGRRTGIVSRGGSILAKWCVAHHQENF
LYTHFEEICEIMKAYDVAFSLGDGLRPGSAADANDEAQFAELRTLGELTQVAWRHEVQTM
IEGPGHVPMHLVQANMDEQLRHCHEAPFYTLGPLTVDIAPGYDHIASAIGAAMIGWMGTA
MLCYVTPKEHLGLPDRDDVRQGIVAYRIAAHAADIAKGHPGARAHDDAMSKARFEFRWRD
QFALGLDPQTAEAFHDETLPKDSSKEAHFCSMCGPRFCSMKITRELREYAQARGIGEDEA
VQRGLADKSTEFRAAGGGFYVPLATRRDGPLPGDPA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccggcgacctgcagcagcggctgtccctgagccgcgaacccttcccccag
tcccgcaaggtttacgtgcccggcgcctcgccggcggtgcgcgtgccgatgcgcgagatc
acgctgagcaacggcgagagcgtcacgctctacgacacctcgggcccctacaccgacccg
gcggtggcgctcgacgtgcgccgcggcctgccttcggtgcgcggcgcctggctggacgaa
cgtgccgacaccgtggcctacgacggccgcccgcccgctgcgcaggacgacggtggccgc
cacggcgacgccgccgatgcccgcctggacgagctgcgccgcgaggcggccgccttgcag
cggcggccgcgccgcgccgcggccggggccagcgtgacgcagatgcactacgcgcgccgc
ggcatcgtcacgccggagatggagtacgtcgcgctgcgcgagaacggccgccgcgagtgg
atgcgcgagtacctcggcgacgccgcgcgcgaagcccggttgcgcggcaacccgcggggc
gcctgcatccccgagacgatcacgcccgagttcgtgcgcgacgaggtggcgcgcggccgc
gcggtgatcccggccaatgtcaaccaccccgagctcgagccgatgatcatcggccgcaac
ttccgcgtgaaggtcaacgccaacatcggcaactcgccggtgacgtcctcgatcgaggag
gaggtcgagaagctggtctgggcgatccgctggggcgccgacacggtgatggacctgtcg
accggccgccacatccacaccacgcgcgactggatcgtgcgcaactcgccggtgccggtg
ggcacggtgccgatctaccaggcgctggagaaggtgggcggcgtcgccgaggacctgagc
tggccgctgctgcgcgacacgctgatcgagcaggcggagcagggcgtcgactacttcacc
ttgcacgccgggctgcgcctgcccttcgtgccgctgactgccgggcggcgcaccggcatc
gtctcgcgcggcggctcgatcctcgccaagtggtgcgtcgcccatcaccaggagaacttc
ctctacacgcacttcgaggagatctgcgaaatcatgaaggcctacgacgtggccttctcg
ctcggcgacggcctgcgcccgggctcggcggccgacgccaacgacgaggcccagttcgcc
gagctgcgcacgctgggcgagctgacgcaggtcgcctggcggcacgaggtgcagacgatg
atcgaaggcccgggccacgtgccgatgcacctggtgcaggccaacatggacgagcagctg
cgccactgccacgaggcgccgttctacacgctggggccgctgacggtggacatcgcgccg
ggctacgaccacatcgccagcgcgatcggcgcggcgatgatcggctggatgggcaccgcg
atgctctgctacgtgacgcccaaggagcacctgggcctgcccgaccgcgacgacgtgcgc
cagggcatcgtcgcctaccgcatcgccgcgcacgccgccgacatcgccaagggccacccc
ggcgcacgcgcgcacgacgacgcgatgagcaaggcgcgcttcgagttccgctggcgcgac
cagttcgcgctcggcctggacccgcagaccgccgaggccttccacgacgagacgctgccc
aaggactcgtccaaggaggcgcacttctgctcgatgtgcgggccgcgcttctgcagcatg
aagatcacgcgcgagctgcgcgagtacgcgcaggcccggggcatcggcgaagacgaggcg
gtgcagcgcggcctggccgacaagagcaccgagttcagggccgccggcggcgggttctac
gtgccgctggcaacacgtcgcgacgggccgcttcccggtgatccggcctga
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