Rubrivivax benzoatilyticus: RBXJA2T_18618
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Entry
RBXJA2T_18618 CDS
T04092
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rbn
Rubrivivax benzoatilyticus
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbn03000
]
RBXJA2T_18618
Transcription factors [BR:
rbn03000
]
Prokaryotic type
Helix-turn-helix
Other families
RBXJA2T_18618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
AAA_5
HTH_30
Mg_chelatase
HTH_20
AAA_2
AAA
HTH_17
HTH_23
HTH_1
AAA_16
HTH_7
Xre-like-HTH
PAS
HTH_28
HTH_29
HTH_22
nSTAND6
HTH_Tnp_1
RWP-RK
Phage_NinH
HTH_11
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
EGJ12363
LinkDB
All DBs
AA seq
638 aa
AA seq
DB search
MPSSLLAARTPPARLREARRRFFDTGELADDAFEPALTRSWRRSRDFGLAPSGRFAGAPH
ASSAQLARALDRQHEFVAHARPVMEFLFDQTRDTDSMVILADAQGMLLHALGDAGFVDRA
QRVALRPGASWHEQWRGTNAVGTAIAEGAPVVVHGSEHYLERNAFLTCTAAPIADPAGRL
LGVLDISGDHRGYHRHTLALVRSAARIIEHRLFDTRHAAGLRLRLHAQPEGLGTVTEGLL
AVSEDGWIVGANGVAMAMLGLTPGSVGALTLERVLPLDIATLAAWSRGSAAHAVRRDDGS
VLWLRVEGGRSLGVRPVAPAAPAVADALARLDTGDHAMQAAIGRARRVLDKPISLLLQGE
SGVGKELFARAVHRSSARRDAPFVAVNCAALPETLIEAELFGYRPGAFTGAARDGAPGRI
REAHGGTLFLDEIGDMPAALQTRLLRVLQEREVVPLGGGRPQAVDFRLICATHRNLREAI
DAGRFREDLYYRLNGLALQLPPLRQRGDQAALVAGMLRELLPARDVRLAPEVAQAFARHR
WPGNLRQLHNALATACALLDEHEDEIGWGHLSDDLAEDLRQRPAAPAPVADAVDLRSQSE
RTVRQVIETCAGNLSEAARRLGISRNTLYRKMRELRLR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcccagttccctgctcgccgcgcgcacgccgccggcccggctgcgcgaagcgcggcgc
cgcttcttcgacaccggcgagctcgccgacgacgccttcgagcccgcgctgacacgcagc
tggcgccgcagccgcgacttcggcctggcgcccagcgggcgtttcgccggcgcgccgcac
gcgtcgtcggcgcagctggcgcgtgcgctggaccggcagcacgagttcgtcgcccacgcg
cgtccggtgatggagttcctgttcgaccagacgcgcgacaccgacagcatggtcatcctc
gccgacgcccagggcatgctgctgcatgccctgggtgacgccggcttcgtcgaccgcgcc
cagcgtgtcgcgctgcgcccgggcgcgagctggcacgaacaatggcgcggcaccaacgcc
gtcggcacggcgatcgccgaaggcgcgccggtcgtcgtgcacggcagcgagcactacctg
gagcgcaacgccttcctgacctgcaccgcagcgccgatcgccgatccggccggccggctg
ctgggcgtgctcgacatctccggcgaccaccgcggctaccaccgccacacgctggcgctg
gtgcgctcggcggcgcgcatcatcgagcaccgcctgttcgacacccgccacgccgccggc
ctgcgcctgcggctgcacgcccagcccgagggcctgggcacggtcaccgaagggctgctc
gccgtgtccgaggacggctggatcgtcggcgccaacggcgtcgcgatggcgatgctgggg
ctgacgccgggatcggtcggcgcgctgacgctggaacgtgtgctgccgctggacatcgcc
acgctggccgcctggagccgcggcagcgccgcgcatgccgtgcgtcgcgacgacggcagc
gtgctgtggctgcgggtcgaaggcggccgcagcctgggcgtgcggccggtcgccccggcg
gcgccggcggtggccgacgcgctggcgcggctggacaccggcgaccacgcgatgcaggcc
gcgatcggccgcgcccggcgtgtgctcgacaagccgatctcgctgctgctgcaaggcgag
tcgggcgtcggcaaggagctgttcgcacgcgccgtgcaccgcagcagcgcacgccgcgac
gcgcccttcgtcgccgtcaactgcgccgcgctgcccgagacgctgatcgaggccgagctc
ttcggctaccgccccggcgccttcaccggcgcggcgcgcgacggcgcccccgggcgcatc
cgcgaggcccacggcggcacgctgttcctcgacgagatcggcgacatgccggcggcgctg
cagacgcggctgctgcgcgtgctgcaggagcgcgaggtcgtgccgctgggcggcgggcgg
ccgcaggcggtggacttccgcctgatctgcgccacccaccgcaacctgcgcgaggcgatc
gacgccggccgcttccgcgaggacctgtactaccgcctcaacggcctggcgctgcagttg
ccgccgctgcgccagcgcggcgatcaggcggcgctggtggccggcatgctgcgcgaactg
ctgccggcacgcgacgtgcggctggcacccgaggtcgcgcaagccttcgcgcgccaccgc
tggccgggcaacctgcgccagctgcacaacgcgctggccaccgcctgcgcgctgctcgac
gaacacgaggacgagatcggctggggccacctgagcgacgacctcgcggaggacctgcgc
cagcgcccggccgcgccggcgccggtggccgacgcggtcgacctgcgctcgcagtccgag
cgcaccgtgcgccaggtgatcgagacctgcgccggcaacctgtcggaggccgcgcgccgg
ctgggcatcagccgcaacacgctgtaccgcaagatgcgcgagctgcggctgcgctga
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