Rubrivivax benzoatilyticus: RBXJA2T_18713
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Entry
RBXJA2T_18713 CDS
T04092
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
rbn
Rubrivivax benzoatilyticus
Brite
KEGG Orthology (KO) [BR:
rbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbn03000
]
RBXJA2T_18713
Transcription factors [BR:
rbn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RBXJA2T_18713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
PBP_like_2
MFD_D3
Motif
Other DBs
NCBI-ProteinID:
EGJ12382
LinkDB
All DBs
AA seq
307 aa
AA seq
DB search
MNVTFRQLRVFVEVARQGSVQGAAEVLHLTPPAVSLQIKEIESQVGHKLFERTHRRMSLS
TAGEYFLVYARRLLGTLKEAEDAMARFARLESGRLTIGMVSSAKYFLPQLLAKFHTEHPA
IDVRLRLGNREALVAMMAANEVDLSVMGRPPVDFPSRAEPFAKHPHVLVTAPDHRFAHAE
SVPAAALAHEPFIVREPASGTRTALQEYLDQYRLKPTFVMEMPSNEAIKQAVMAGMGVSL
LSLHTIGLEWSAGLIAAPHVEGLPLMRRWNIVNTAAKQLSPAAEAFRYFVLDRGEAHLAA
MFNRADP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtcaccttccgccagctccgggtttttgtcgaggtcgcccgccagggcagcgtg
cagggtgcggccgaggtgttgcacctgacgccgccggcggtgtcgctgcagatcaaggag
atcgagtcccaggtcggccacaagctgttcgagcgcacgcaccgccgcatgtcgctgtcg
accgcgggcgagtacttcctggtctacgcacgccggctgctgggcacgctgaaggaggcc
gaggacgcgatggcgcgtttcgcccggctggaaagcggccggctgacgatcggcatggtc
agcagcgccaagtacttcctgccgcagctgctggccaagttccacaccgagcacccggcg
atcgacgtgcgcctgcgcctgggcaaccgcgaggcgctggtggcgatgatggcggccaac
gaggtcgacctcagcgtgatgggccgcccgccggtggacttcccgagccgtgccgagccc
ttcgccaaacatccgcacgtgctcgtcaccgcgccggaccaccgcttcgcgcacgccgag
agcgtgccggccgcggcgctggcccacgagcccttcatcgtgcgcgagccggcctcgggc
acccgcaccgcgctgcaggagtacctggaccagtaccgcctgaagccgaccttcgtgatg
gagatgcccagcaacgaggcgatcaagcaggcggtgatggccggcatgggcgtcagcctg
ctgtcgctgcacaccatcgggctggaatggtcggccgggctgatcgccgcgccgcacgtc
gagggcctgccgctgatgcggcgctggaacatcgtcaacacggcggccaagcagctgtcg
ccggcggccgaggccttccgctacttcgtgctcgaccggggcgaggcccatctcgcggcg
atgttcaaccgcgccgacccctag
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