Rickettsia bellii OSU 85-389: A1I_00620
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Entry
A1I_00620 CDS
T00602
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
rbo
Rickettsia bellii OSU 85-389
Brite
KEGG Orthology (KO) [BR:
rbo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A1I_00620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbo03021
]
A1I_00620
Transcription machinery [BR:
rbo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A1I_00620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
Sigma70_r1_1
Nrap_D6
VBS_C3G9
Motif
Other DBs
NCBI-ProteinID:
ABV78526
LinkDB
All DBs
Position
complement(112322..113866)
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AA seq
514 aa
AA seq
DB search
MTNTDNNNLNKIDSLLKKAKSKKGSVTYNDINRALPDGTSVEEIDKVMFRFSEAEVDILD
TNEDDAIKIDDIEMEEGFKISTNIDHEPEDETEEENIGTTDDPVRLYLKDMGGVDLLTRE
NEVEIAKRIEEGRKTLIAALCRSPIAMDKFRKWYADLVNENNMLLRDLIDLESNMMHDDE
TSESEDDHNSDHEEEEQDHDHDHEENILSMSKVETQILPNIIERMKKIAFICEELLIETK
KSFEKSAGPKILQNSKKYNDNLELLISEVSEIHFNSKRTEEILSEMYGINRDLINKETAF
LKLAEKYGITRQNFLDEYIGAVINAAWKEKMLKNKKAGWKELLTKESDYIDQMIAELSAI
EINTGLLVNDFKKLVNTIQKSERQTLQAKKDMIEANLRLVISIAKKYANRGLQFLDLIQE
GNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKIIRTS
RQMLNELGYEPTPAEIAARLSMPIDKVRKVYENS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatacagataataataatctaaataaaatagatagtttactaaaaaaagctaaa
tctaaaaaaggttcggttacttataatgatataaatagagctcttcctgatgggacatct
gtggaagagatagataaggttatgtttagattttccgaggcggaagtagatattttagat
actaacgaggatgacgcaattaagattgatgacattgaaatggaggaaggttttaaaata
tccaccaatattgatcatgaacctgaagatgaaacagaggaagaaaatataggtactact
gatgatccggtaaggctttacctcaaggatatgggaggggttgatctacttactcgtgaa
aatgaagtcgaaatagcaaaaagaattgaagaaggtcgcaaaacattgatcgctgcatta
tgtagaagtcctattgctatggataagtttagaaagtggtatgcggatttagttaatgag
aataatatgttactgcgtgatctcatagatctagaatctaatatgatgcatgatgatgag
acttcggaaagtgaagacgatcataatagtgatcatgaagaagaagagcaggatcatgac
cacgaccatgaagaaaatatcttatcaatgtctaaagtggaaacgcagatattgcctaat
attatagagcgaatgaaaaagatcgcttttatttgtgaagaattattaattgaaactaaa
aaatcttttgaaaagtctgctggtccaaaaatattacaaaatagtaaaaaatataatgat
aatttagaactattaattagcgaagtttcagaaatacattttaattctaaaagaacagaa
gaaattctatctgaaatgtatgggataaatcgtgatttaataaataaagaaacagctttc
ttaaagcttgctgaaaaatacggaataactcgtcagaacttcttagatgaatatatagga
gccgtaattaatgcagcatggaaagaaaaaatgctgaaaaataagaaagctggttggaaa
gaattgctcactaaagaatcggattatatagaccagatgattgctgaattatcagcgata
gagattaataccggtcttctagttaatgattttaaaaagttagtaaatactatccaaaaa
agtgagcgacaaacgttgcaagcgaaaaaagatatgatagaggcgaatttacgcttagta
atatctattgctaaaaaatatgctaatagaggcttacaattcttagacttaattcaagaa
ggtaacataggacttatgaaagcggttgataaatttgaatatcgccgtggttataaattc
tctacttacgctacttggtggattagacaagcaataacaagagcgattgccgatcaagca
aggactatacgtattcctgtgcatatgatcgaaacaattaataagataataagaacctcg
agacaaatgcttaatgagcttgggtatgaaccaactccagcagaaatagcagcaagactt
tctatgccgattgataaggtaagaaaagtttatgaaaatagctaa
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