Rickettsia bellii OSU 85-389: A1I_04980
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Entry
A1I_04980 CDS
T00602
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rbo
Rickettsia bellii OSU 85-389
Pathway
rbo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1I_04980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbo03019
]
A1I_04980
03016 Transfer RNA biogenesis [BR:
rbo03016
]
A1I_04980
Enzymes [BR:
rbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A1I_04980
Messenger RNA biogenesis [BR:
rbo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A1I_04980
Transfer RNA biogenesis [BR:
rbo03016
]
Prokaryotic type
tRNA degradation factors
A1I_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_DUF2096_C
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
ABV79329
UniProt:
A8GWV2
LinkDB
All DBs
Position
941687..943921
Genome browser
AA seq
744 aa
AA seq
DB search
MFNEIIKTVEWGGKTLELSTGKIARQADGAVTVKMGNSVLLCTAVTAAKAKEGIGFFPLT
INYREMAYAAGKIPGGFFKREGKASDREVLVSRLIDRPIRPLFHPAFVNETFVTCTVLSY
DPETPVDILAIIGASAALSLSPAPYLEIVAASKVGLINGEFFLHPTLDLLKTSQLDLVVA
GTNDSVMMVESEAHLLSEEQMLAAVKFGFDSFQPVVNIIKELAAEAKKSKLEMQDLYPAE
LKNEIKKLFAKEIEQTFAIKSKQERSTNLELIPEKVLKHFADDIESKKYNNYQIESALKS
VESDILRGNILQKNKRIDGRTTTDIRQITCEVGLLPCAHGSALFTRGETQSLVSSTFGTS
LDEQIIDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPGRREVGHGKLAWRAVNPVLPTKT
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAPVAGIAMGLVKEDEKFAVLS
DILGDEDYFGDMDFKVAGTSEGITALQMDIKIRGVNFEIMKIALEQARLGRLHILEQMNK
VISKPNNEMSKNAPSTTTLKVDKDKIRDIIGPGGKVIKEICETSGAKIDISDDGTVSIYA
SDKDKLKVALDKVKAIAIEPEIGEVFNGTVMKILDSGAFVNYLGNKDGFVHISEIAEERI
ESVGSVLKQGDIVKVKLIGFDNKGKAKLTIKNAEKDKSSANPKPKNSPKEHQEPEKRDNG
KKRAWNEDNNAETTEVVTERKYFS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgagataattaaaacagttgaatggggcggaaaaactcttgaacttagtact
ggcaagatagctcgccaagctgatggagcagttactgttaaaatgggtaattctgtctta
ctatgtacagcagtaactgctgccaaagcaaaagaaggtattggcttttttcctctaaca
attaattatagagaaatggcatatgctgctggtaaaataccaggcggcttttttaagcgt
gagggtaaagcatcagatcgggaagttttagtatcacgtctgatagatagaccgatcaga
ccattatttcaccctgcttttgttaatgaaacatttgttacctgcactgttctttcatat
gaccctgaaacaccagttgatatacttgctattatcggtgcttccgctgcacttagcctt
tcacctgcaccttatctagaaatagttgctgcaagcaaagtaggcttaataaacggggaa
ttctttttacacccaactcttgacttattaaagacaagccagcttgatttggttgttgca
ggaacaaacgactctgtaatgatggttgaatcagaagcacatttactttctgaagagcaa
atgcttgctgctgtaaaattcggttttgacagtttccaaccagtagtaaatattattaaa
gaacttgcagctgaagctaaaaaatcgaagcttgaaatgcaagatttatatcctgctgaa
ttaaagaatgaaatcaaaaaattatttgcaaaagaaattgagcaaacttttgcaattaaa
tctaaacaagaacgtagtactaatttagagctaatacctgaaaaagtacttaagcatttt
gcggatgatatagaaagtaagaaatataataattaccaaatcgaatccgctttaaaatcc
gttgaatccgatatattacgtggtaatattttacaaaaaaataaacgtatcgatggacgt
actacaacagatataagacaaattacttgtgaagttggattattaccttgtgctcacggc
tcagctttatttactagaggtgaaacacagagcttagtaagtagtacttttggaactagc
ttagatgaacaaataatcgatagccttgagggtgaatataaagaacgctttatgcttaat
tatatcttcccgccttactccgttaatgaagcaatgccgatgaaagctccaggaagacgt
gaagttgggcatggtaaactcgcttggcgtgctgttaatccggtattgcctactaaaaca
cagttcccttattctattagagtagttgcggaaactaccgaatctaatggatcttcttca
atggcaacagtttgtggtagttcacttgctttaatgtatgctggcgttccaataaaagca
ccggtagcaggtattgctatggggcttgttaaggaggatgaaaaatttgcagtattatct
gatattcttggcgatgaagattatttcggcgatatggactttaaggttgcaggtactagc
gagggtatcaccgcattacaaatggatattaaaatacgaggggtaaatttcgaaataatg
aaaatagccttagaacaggcacgccttggacgtttgcatatacttgagcaaatgaataaa
gttattagtaaaccaaataatgagatgagcaaaaacgctccttctactactactttaaaa
gttgataaagataagatcagagatattatcggtcctggtggtaaagtaataaaggaaatt
tgtgaaactagcggtgctaaaattgatataagcgatgatggcacagtttctatttatgct
tcagataaagacaagctaaaagttgctttagacaaagttaaagctattgctattgaacct
gaaataggtgaagtatttaacggcaccgtgatgaaaatattagattctggtgcttttgtt
aattatttaggcaataaagatggttttgtccatattagcgaaattgccgaagaaagaatc
gaatcagtcggcagcgttttaaagcaaggtgatatagtaaaagttaagcttatcgggttc
gataataaaggtaaagcaaaactaactattaaaaatgctgagaaagataaatcttcagca
aacccaaaaccaaaaaatagtcctaaagaacatcaagaacctgaaaaacgggataatggt
aaaaaaagagcttggaacgaagataataatgctgaaacaactgaagtagttacagaacgt
aagtatttttcctag
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